RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 SCRT1Q9BWW7 348 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 CACNG6Q9BXT2 260 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 API5Q9BZZ5 524 aaKnown RBP2.77□□□□□ -1.97
SNHG1-224ENST00000545688 MFSD1Q9H3U5 465 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 ERVK-18Q9QC07 812 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 FOXA2Q9Y261 457 aaPredicted RBP2.77□□□□□ -1.97
SNHG1-224ENST00000545688 NLRC5Q86WI3 1866 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 AKAP13Q12802 2813 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 TIMM44O43615 452 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 STX6O43752 255 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 ZNF254O75437 659 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 MMP23AO75900 390 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 DCNP07585 359 aaKnown RBP2.76□□□□□ -1.97
SNHG1-224ENST00000545688 RETP07949 1114 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 SERPINF2P08697 491 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 ZNF286BP0CG31 522 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 SMIM10L2AP0DMW4 78 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 SMIM10L2BP0DMW5 78 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 CYP11B1P15538 503 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 BNIP1Q12981 228 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 MPPED2Q15777 294 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 MARCH8Q5T0T0 291 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 GALNTL5Q7Z4T8 443 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 OR8H3Q8N146 312 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 P3H4Q92791 437 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 ATP6V0A1Q93050 837 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 CLDN23Q96B33 292 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 TAAR1Q96RJ0 339 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 IL4I1Q96RQ9 567 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 RTBDNQ9BSG5 229 aaPredicted RBP2.76□□□□□ -1.97
SNHG1-224ENST00000545688 TSPYL1Q9H0U9 437 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 OR51J1Q9H342 316 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 PTGES2Q9H7Z7 377 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 MEPEQ9NQ76 525 aaPredicted RBP2.76□□□□□ -1.97
SNHG1-224ENST00000545688 PRMT8Q9NR22 394 aaPredicted RBP2.76□□□□□ -1.97
SNHG1-224ENST00000545688 CNIH4Q9P003 139 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 EPS15L1Q9UBC2 864 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.76□□□□□ -1.97
SNHG1-224ENST00000545688 COL12A1Q99715 3063 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 CFAP46Q8IYW2 2715 aa2.76□□□□□ -1.97
SNHG1-224ENST00000545688 APC2O95996 2303 aa2.75□□□□□ -1.97
SNHG1-224ENST00000545688 NRCAMQ92823 1304 aa2.75□□□□□ -1.97
SNHG1-224ENST00000545688 IGSF9BQ9UPX0 1349 aa2.75□□□□□ -1.97
SNHG1-224ENST00000545688 TRBV7-9A0A0J9YWB2 115 aa2.75□□□□□ -1.97
SNHG1-224ENST00000545688 HMGB1P1B2RPK0 211 aaPredicted RBP2.75□□□□□ -1.97
SNHG1-224ENST00000545688 CACNB4O00305 520 aaPredicted RBP2.75□□□□□ -1.97
SNHG1-224ENST00000545688 CFLARO15519 480 aa2.75□□□□□ -1.97
SNHG1-224ENST00000545688 SURF6O75683 361 aaKnown RBP2.75□□□□□ -1.97
SNHG1-224ENST00000545688 LGALS2P05162 132 aa2.75□□□□□ -1.97
SNHG1-224ENST00000545688 SDC1P18827 310 aa2.75□□□□□ -1.97
SNHG1-224ENST00000545688 RPS9P46781 194 aaKnown RBP2.75□□□□□ -1.97
SNHG1-224ENST00000545688 SMSP52788 366 aa2.75□□□□□ -1.97
SNHG1-224ENST00000545688 CAMK4Q16566 473 aa2.75□□□□□ -1.97
SNHG1-224ENST00000545688 CLPPQ16740 277 aaPredicted RBP2.75□□□□□ -1.97
SNHG1-224ENST00000545688 OR2B11Q5JQS5 317 aa2.75□□□□□ -1.97
SNHG1-224ENST00000545688 LINC00696Q6ZRV3 163 aa2.75□□□□□ -1.97
SNHG1-224ENST00000545688 HSD17B13Q7Z5P4 300 aaPredicted RBP2.75□□□□□ -1.97
SNHG1-224ENST00000545688 CHCHD4Q8N4Q1 142 aa2.75□□□□□ -1.97
SNHG1-224ENST00000545688 NAT8LQ8N9F0 302 aa2.75□□□□□ -1.97
SNHG1-224ENST00000545688 COLGALT1Q8NBJ5 622 aa2.75□□□□□ -1.97
SNHG1-224ENST00000545688 FBXO30Q8TB52 745 aa2.75□□□□□ -1.97
SNHG1-224ENST00000545688 ADAMTS16Q8TE57 1224 aa2.75□□□□□ -1.97
SNHG1-224ENST00000545688 GPR137Q96N19 417 aa2.75□□□□□ -1.97
SNHG1-224ENST00000545688 NICN1Q9BSH3 213 aa2.75□□□□□ -1.97
SNHG1-224ENST00000545688 CNPY3Q9BT09 278 aa2.75□□□□□ -1.97
SNHG1-224ENST00000545688 FTHL17Q9BXU8 183 aa2.75□□□□□ -1.97
SNHG1-224ENST00000545688 ABCB8Q9NUT2 735 aa2.75□□□□□ -1.97
SNHG1-224ENST00000545688 PURGQ9UJV8 347 aaKnown RBP2.75□□□□□ -1.97
SNHG1-224ENST00000545688 HECTD1Q9ULT8 2610 aa2.75□□□□□ -1.97
SNHG1-224ENST00000545688 ACACAQ13085 2346 aa2.75□□□□□ -1.97
SNHG1-224ENST00000545688 CACNA1EQ15878 2313 aa2.75□□□□□ -1.97
SNHG1-224ENST00000545688 DOCK8Q8NF50 2099 aa2.75□□□□□ -1.97
SNHG1-224ENST00000545688 DNHD1Q96M86 4753 aa2.74□□□□□ -1.97
SNHG1-224ENST00000545688 BAZ2AQ9UIF9 1905 aaKnown RBP2.74□□□□□ -1.97
SNHG1-224ENST00000545688 DENND4AQ7Z401 1863 aa2.74□□□□□ -1.97
SNHG1-224ENST00000545688 PLXNA4Q9HCM2 1894 aa2.74□□□□□ -1.97
SNHG1-224ENST00000545688 SPRR5A0A1B0GTR4 108 aa2.74□□□□□ -1.97
SNHG1-224ENST00000545688 NMT2O60551 498 aa2.74□□□□□ -1.97
SNHG1-224ENST00000545688 SDC3O75056 442 aa2.74□□□□□ -1.97
SNHG1-224ENST00000545688 FOXH1O75593 365 aa2.74□□□□□ -1.97
SNHG1-224ENST00000545688 PDHBP11177 359 aa2.74□□□□□ -1.97
SNHG1-224ENST00000545688 TOP1P11387 765 aaKnown RBP2.74□□□□□ -1.97
SNHG1-224ENST00000545688 RPS2P15880 293 aaKnown RBP2.74□□□□□ -1.97
SNHG1-224ENST00000545688 CD52P31358 61 aa2.74□□□□□ -1.97
SNHG1-224ENST00000545688 HTR4Q13639 388 aa2.74□□□□□ -1.97
SNHG1-224ENST00000545688 EIF2B1Q14232 305 aaKnown RBP2.74□□□□□ -1.97
SNHG1-224ENST00000545688 KCTD9Q7L273 389 aa2.74□□□□□ -1.97
SNHG1-224ENST00000545688 PRSS42Q7Z5A4 293 aa2.74□□□□□ -1.97
SNHG1-224ENST00000545688 KIR2DL5BQ8NHK3 375 aa2.74□□□□□ -1.97
SNHG1-224ENST00000545688 DLX4Q92988 240 aaPredicted RBP2.74□□□□□ -1.97
SNHG1-224ENST00000545688 C18orf25Q96B23 403 aaPredicted RBP2.74□□□□□ -1.97
SNHG1-224ENST00000545688 ZNF707Q96C28 371 aaPredicted RBP2.74□□□□□ -1.97
SNHG1-224ENST00000545688 CFAP36Q96G28 342 aa2.74□□□□□ -1.97
SNHG1-224ENST00000545688 TMEM117Q9H0C3 514 aa2.74□□□□□ -1.97
SNHG1-224ENST00000545688 GLT8D2Q9H1C3 349 aa2.74□□□□□ -1.97
SNHG1-224ENST00000545688 PXMP2Q9NR77 195 aa2.74□□□□□ -1.97
SNHG1-224ENST00000545688 RGS18Q9NS28 235 aa2.74□□□□□ -1.97
SNHG1-224ENST00000545688 ZCCHC3Q9NUD5 404 aaKnown RBP2.74□□□□□ -1.97
SNHG1-224ENST00000545688 ELOVL2Q9NXB9 296 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms