RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 ENPP1P22413 925 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 ELK4P28324 431 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 RPL3P39023 403 aaKnown RBP7.52□□□□□ -1.21
USP28-215ENST00000545608 ATP12AP54707 1039 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 ATP5J2P56134 94 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 TP53BP2Q13625 1128 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 TAB1Q15750 504 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 SPDYE7PQ495Y7 208 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 TMEM201Q5SNT2 666 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 SFRP5Q5T4F7 317 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 FCRLAQ7L513 359 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 ATG4DQ86TL0 474 aaPredicted RBP7.52□□□□□ -1.21
USP28-215ENST00000545608 RIMKLAQ8IXN7 391 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 ZNF619Q8N2I2 560 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 STEAP2Q8NFT2 490 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 OR56A1Q8NGH5 318 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 RFWD2Q8NHY2 731 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 TCP10LQ8TDR4 215 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 GATAD2BQ8WXI9 593 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 NEUROG1Q92886 237 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 CPNE4Q96A23 557 aaPredicted RBP7.52□□□□□ -1.21
USP28-215ENST00000545608 REXO5Q96IC2 774 aaKnown RBP7.52□□□□□ -1.21
USP28-215ENST00000545608 OR7D2Q96RA2 312 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 HDHD5Q9BXW7 423 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 HOXD1Q9GZZ0 328 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 CXorf56Q9H5V9 222 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 EML4Q9HC35 981 aaKnown RBP7.52□□□□□ -1.21
USP28-215ENST00000545608 TIGARQ9NQ88 270 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 KLHL13Q9P2N7 655 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 ZDHHC2Q9UIJ5 367 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 ING1Q9UK53 422 aaPredicted RBP7.52□□□□□ -1.21
USP28-215ENST00000545608 FAF1Q9UNN5 650 aaPredicted RBP7.52□□□□□ -1.21
USP28-215ENST00000545608 TRIM33Q9UPN9 1127 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 LAMP3Q9UQV4 416 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 DTNAQ9Y4J8 743 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 ACTL7BQ9Y614 415 aa7.52□□□□□ -1.21
USP28-215ENST00000545608 RAI1Q7Z5J4 1906 aaPredicted RBP7.52□□□□□ -1.21
USP28-215ENST00000545608 NIPBLQ6KC79 2804 aaeCLIP7.51□□□□□ -1.21
USP28-215ENST00000545608 HEATR5AQ86XA9 2040 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 ELOA3CA0A087WX78 387 aaPredicted RBP7.51□□□□□ -1.21
USP28-215ENST00000545608 ELOA3DA6NLF2 546 aaPredicted RBP7.51□□□□□ -1.21
USP28-215ENST00000545608 ZNF814B7Z6K7 855 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 C9JVG2 144 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 H3BNH8 94 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 CFLARO15519 480 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 SKAP2O75563 359 aaPredicted RBP7.51□□□□□ -1.21
USP28-215ENST00000545608 LYPLA1O75608 230 aaPredicted RBP7.51□□□□□ -1.21
USP28-215ENST00000545608 RGS9O75916 674 aaPredicted RBP7.51□□□□□ -1.21
USP28-215ENST00000545608 BPNT1O95861 308 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 ADAP00813 363 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 YES1P07947 543 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 SOD3P08294 240 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 CREB1P16220 341 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 EDNRAP25101 427 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 SUMO3P55854 103 aaPredicted RBP7.51□□□□□ -1.21
USP28-215ENST00000545608 HBA1P69905 142 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 TNK1Q13470 666 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 MPP2Q14168 576 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 QPRTQ15274 297 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 RNPS1Q15287 305 aaKnown RBP7.51□□□□□ -1.21
USP28-215ENST00000545608 LSM12Q3MHD2 195 aaKnown RBP7.51□□□□□ -1.21
USP28-215ENST00000545608 ELOA3BQ3SY89 546 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 ATP6AP1LQ52LC2 224 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 SLC25A53Q5H9E4 307 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 NCMAPQ5T1S8 102 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 ADAM5Q6NVV9 412 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 OLIG3Q7RTU3 272 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 CLEC4FQ8N1N0 589 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 ZNF614Q8N883 585 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 FNDC5Q8NAU1 212 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 ZNF527Q8NB42 609 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 ELOA3Q8NG57 546 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 OR5D16Q8NGK9 328 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 OR5W2Q8NH69 310 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 OR5AK3PQ8NH89 298 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 SFXN5Q8TD22 340 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 ZFP90Q8TF47 636 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 ZNF775Q96BV0 537 aaPredicted RBP7.51□□□□□ -1.21
USP28-215ENST00000545608 MRGPRX4Q96LA9 322 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 SDF2Q99470 211 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 MDFIQ99750 246 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 TACO1Q9BSH4 297 aaKnown RBP7.51□□□□□ -1.21
USP28-215ENST00000545608 QRSL1Q9H0R6 528 aaKnown RBP7.51□□□□□ -1.21
USP28-215ENST00000545608 SERHL2Q9H4I8 314 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 GP6Q9HCN6 339 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 ATAD3AQ9NVI7 634 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 PRSS50Q9UI38 385 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 KCNE5Q9UJ90 142 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 JMJD1CQ15652 2540 aa7.51□□□□□ -1.21
USP28-215ENST00000545608 HIVEP2P31629 2446 aa7.5□□□□□ -1.21
USP28-215ENST00000545608 CENPVL1A0A0U1RR11 272 aa7.5□□□□□ -1.21
USP28-215ENST00000545608 DPRXA6NFQ7 191 aa7.5□□□□□ -1.21
USP28-215ENST00000545608 SERINC4A6NH21 518 aa7.5□□□□□ -1.21
USP28-215ENST00000545608 GJE1A6NN92 205 aa7.5□□□□□ -1.21
USP28-215ENST00000545608 OVOL3O00110 214 aa7.5□□□□□ -1.21
USP28-215ENST00000545608 ETV2O00321 342 aaPredicted RBP7.5□□□□□ -1.21
USP28-215ENST00000545608 CLOCKO15516 846 aa7.5□□□□□ -1.21
USP28-215ENST00000545608 ZNF264O43296 627 aa7.5□□□□□ -1.21
USP28-215ENST00000545608 EIF4E2O60573 245 aaKnown RBP7.5□□□□□ -1.21
USP28-215ENST00000545608 FCMRO60667 390 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms