RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 TMEFF2Q9UIK5 374 aaPredicted RBP12.88□□□□□ -0.35
RTN3-214ENST00000545432 CARD8Q9Y2G2 431 aa12.88□□□□□ -0.35
RTN3-214ENST00000545432 POLR3HQ9Y535 204 aaPredicted RBP12.88□□□□□ -0.35
RTN3-214ENST00000545432 FKBP7Q9Y680 259 aa12.88□□□□□ -0.35
RTN3-214ENST00000545432 ATP23Q9Y6H3 246 aa12.88□□□□□ -0.35
RTN3-214ENST00000545432 ESYT3A0FGR9 886 aa12.87□□□□□ -0.35
RTN3-214ENST00000545432 TMEM89A2RUT3 159 aa12.87□□□□□ -0.35
RTN3-214ENST00000545432 M0R1B8 84 aa12.87□□□□□ -0.35
RTN3-214ENST00000545432 PDPK1O15530 556 aa12.87□□□□□ -0.35
RTN3-214ENST00000545432 EIF4E2O60573 245 aaKnown RBP12.87□□□□□ -0.35
RTN3-214ENST00000545432 TAC1P20366 129 aa12.87□□□□□ -0.35
RTN3-214ENST00000545432 SLC7A1P30825 629 aa12.87□□□□□ -0.35
RTN3-214ENST00000545432 PHBP35232 272 aa12.87□□□□□ -0.35
RTN3-214ENST00000545432 PRKAG1P54619 331 aa12.87□□□□□ -0.35
RTN3-214ENST00000545432 ATP12AP54707 1039 aa12.87□□□□□ -0.35
RTN3-214ENST00000545432 FOXG1P55316 489 aaPredicted RBP12.87□□□□□ -0.35
RTN3-214ENST00000545432 FOXA1P55317 472 aa12.87□□□□□ -0.35
RTN3-214ENST00000545432 POU6F2P78424 691 aaPredicted RBP12.87□□□□□ -0.35
RTN3-214ENST00000545432 CHRNEQ04844 493 aa12.87□□□□□ -0.35
RTN3-214ENST00000545432 PDE7AQ13946 482 aa12.87□□□□□ -0.35
RTN3-214ENST00000545432 ZNF385BQ569K4 471 aa12.87□□□□□ -0.35
RTN3-214ENST00000545432 SPDYAQ5MJ70 313 aa12.87□□□□□ -0.35
RTN3-214ENST00000545432 LRIG3Q6UXM1 1119 aa12.87□□□□□ -0.35
RTN3-214ENST00000545432 C1orf162Q8NEQ5 155 aaPredicted RBP12.87□□□□□ -0.35
RTN3-214ENST00000545432 TOR1AIP2Q8NFQ8 470 aa12.87□□□□□ -0.35
RTN3-214ENST00000545432 OR5W2Q8NH69 310 aa12.87□□□□□ -0.35
RTN3-214ENST00000545432 FCRL1Q96LA6 429 aa12.87□□□□□ -0.35
RTN3-214ENST00000545432 BPESC1Q9GZL8 116 aa12.87□□□□□ -0.35
RTN3-214ENST00000545432 RAB17Q9H0T7 212 aa12.87□□□□□ -0.35
RTN3-214ENST00000545432 GSTO2Q9H4Y5 243 aa12.87□□□□□ -0.35
RTN3-214ENST00000545432 SLC17A5Q9NRA2 495 aa12.87□□□□□ -0.35
RTN3-214ENST00000545432 NINJ2Q9NZG7 142 aa12.87□□□□□ -0.35
RTN3-214ENST00000545432 TMEM216Q9P0N5 145 aa12.87□□□□□ -0.35
RTN3-214ENST00000545432 DCTN4Q9UJW0 460 aa12.87□□□□□ -0.35
RTN3-214ENST00000545432 A0A1W2PR80 420 aa12.86□□□□□ -0.35
RTN3-214ENST00000545432 CIB4A0PJX0 185 aa12.86□□□□□ -0.35
RTN3-214ENST00000545432 GPR171O14626 319 aa12.86□□□□□ -0.35
RTN3-214ENST00000545432 LILRA1O75019 489 aa12.86□□□□□ -0.35
RTN3-214ENST00000545432 URI1O94763 535 aaPredicted RBP12.86□□□□□ -0.35
RTN3-214ENST00000545432 STAMBPO95630 424 aa12.86□□□□□ -0.35
RTN3-214ENST00000545432 INHBAP08476 426 aa12.86□□□□□ -0.35
RTN3-214ENST00000545432 ATP5F1P24539 256 aaPredicted RBP12.86□□□□□ -0.35
RTN3-214ENST00000545432 DIO1P49895 249 aa12.86□□□□□ -0.35
RTN3-214ENST00000545432 GNG11P61952 73 aa12.86□□□□□ -0.35
RTN3-214ENST00000545432 SLC25A3Q00325 362 aa12.86□□□□□ -0.35
RTN3-214ENST00000545432 MLC1Q15049 377 aa12.86□□□□□ -0.35
RTN3-214ENST00000545432 C3orf33Q6P1S2 294 aa12.86□□□□□ -0.35
RTN3-214ENST00000545432 TIFABQ6ZNK6 161 aa12.86□□□□□ -0.35
RTN3-214ENST00000545432 LCA5Q86VQ0 697 aa12.86□□□□□ -0.35
RTN3-214ENST00000545432 COX18Q8N8Q8 333 aa12.86□□□□□ -0.35
RTN3-214ENST00000545432 ZNF527Q8NB42 609 aa12.86□□□□□ -0.35
RTN3-214ENST00000545432 ATP6V1C2Q8NEY4 427 aa12.86□□□□□ -0.35
RTN3-214ENST00000545432 ZFP28Q8NHY6 868 aa12.86□□□□□ -0.35
RTN3-214ENST00000545432 DCAKDQ8WVC6 231 aa12.86□□□□□ -0.35
RTN3-214ENST00000545432 CIDECQ96AQ7 238 aaPredicted RBP12.86□□□□□ -0.35
RTN3-214ENST00000545432 APH1AQ96BI3 265 aa12.86□□□□□ -0.35
RTN3-214ENST00000545432 ANKZF1Q9H8Y5 726 aa12.86□□□□□ -0.35
RTN3-214ENST00000545432 SIRT3Q9NTG7 399 aaPredicted RBP12.86□□□□□ -0.35
RTN3-214ENST00000545432 EMC3Q9P0I2 261 aa12.86□□□□□ -0.35
RTN3-214ENST00000545432 AMDHD2Q9Y303 409 aa12.86□□□□□ -0.35
RTN3-214ENST00000545432 DTNAQ9Y4J8 743 aa12.86□□□□□ -0.35
RTN3-214ENST00000545432 CCT8L1PA6NM43 557 aa12.85□□□□□ -0.35
RTN3-214ENST00000545432 TRIM49D1C9J1S8 452 aa12.85□□□□□ -0.35
RTN3-214ENST00000545432 H3BNH8 94 aa12.85□□□□□ -0.35
RTN3-214ENST00000545432 DNPH1O43598 174 aa12.85□□□□□ -0.35
RTN3-214ENST00000545432 PDE5AO76074 875 aa12.85□□□□□ -0.35
RTN3-214ENST00000545432 IGHV3-9P01782 118 aa12.85□□□□□ -0.35
RTN3-214ENST00000545432 GPC1P35052 558 aa12.85□□□□□ -0.35
RTN3-214ENST00000545432 CDH15P55291 814 aa12.85□□□□□ -0.35
RTN3-214ENST00000545432 CSNK2A1P68400 391 aaPredicted RBP12.85□□□□□ -0.35
RTN3-214ENST00000545432 QPRTQ15274 297 aa12.85□□□□□ -0.35
RTN3-214ENST00000545432 EFNB3Q15768 340 aa12.85□□□□□ -0.35
RTN3-214ENST00000545432 AP1ARQ63HQ0 302 aa12.85□□□□□ -0.35
RTN3-214ENST00000545432 SLC22A9Q8IVM8 553 aa12.85□□□□□ -0.35
RTN3-214ENST00000545432 LINC01356Q8N9X3 169 aa12.85□□□□□ -0.35
RTN3-214ENST00000545432 CDC26Q8NHZ8 85 aa12.85□□□□□ -0.35
RTN3-214ENST00000545432 FBXO30Q8TB52 745 aa12.85□□□□□ -0.35
RTN3-214ENST00000545432 ST8SIA1Q92185 356 aa12.85□□□□□ -0.35
RTN3-214ENST00000545432 ARL8AQ96BM9 186 aa12.85□□□□□ -0.35
RTN3-214ENST00000545432 FAM120BQ96EK7 910 aaKnown RBP12.85□□□□□ -0.35
RTN3-214ENST00000545432 OR5B2Q96R09 309 aa12.85□□□□□ -0.35
RTN3-214ENST00000545432 PAFAH2Q99487 392 aa12.85□□□□□ -0.35
RTN3-214ENST00000545432 TRMOQ9BU70 441 aa12.85□□□□□ -0.35
RTN3-214ENST00000545432 C12orf65Q9H3J6 166 aaKnown RBP12.85□□□□□ -0.35
RTN3-214ENST00000545432 REEP4Q9H6H4 257 aa12.85□□□□□ -0.35
RTN3-214ENST00000545432 NOSIPQ9Y314 301 aaKnown RBP12.85□□□□□ -0.35
RTN3-214ENST00000545432 B9A039 149 aa12.84□□□□□ -0.35
RTN3-214ENST00000545432 ATP6V1G2-DDX39BF2Z307 99 aa12.84□□□□□ -0.35
RTN3-214ENST00000545432 H3BQF6 201 aa12.84□□□□□ -0.35
RTN3-214ENST00000545432 NUDT14O95848 222 aa12.84□□□□□ -0.35
RTN3-214ENST00000545432 HMGN2P05204 90 aaKnown RBP12.84□□□□□ -0.35
RTN3-214ENST00000545432 H3F3AP84243 136 aa12.84□□□□□ -0.35
RTN3-214ENST00000545432 IQCCQ4KMZ1 466 aa12.84□□□□□ -0.35
RTN3-214ENST00000545432 TIGD2Q4W5G0 525 aa12.84□□□□□ -0.35
RTN3-214ENST00000545432 ANKRD26P1Q6NSI1 321 aa12.84□□□□□ -0.35
RTN3-214ENST00000545432 CDC73Q6P1J9 531 aa12.84□□□□□ -0.35
RTN3-214ENST00000545432 UGT2A3Q6UWM9 527 aa12.84□□□□□ -0.35
RTN3-214ENST00000545432 PSMA8Q8TAA3 256 aa12.84□□□□□ -0.35
RTN3-214ENST00000545432 FBXO17Q96EF6 278 aa12.84□□□□□ -0.35
RTN3-214ENST00000545432 C1QTNF6Q9BXI9 259 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms