RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 SELENBP1Q13228 472 aa8.18□□□□□ -1.1
CHD4-212ENST00000545083 UAP1Q16222 522 aaPredicted RBP8.18□□□□□ -1.1
CHD4-212ENST00000545083 VPS26BQ4G0F5 336 aa8.18□□□□□ -1.1
CHD4-212ENST00000545083 UNC50Q53HI1 259 aa8.18□□□□□ -1.1
CHD4-212ENST00000545083 SLC25A53Q5H9E4 307 aa8.18□□□□□ -1.1
CHD4-212ENST00000545083 EXOSC6Q5RKV6 272 aaKnown RBP8.18□□□□□ -1.1
CHD4-212ENST00000545083 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.18□□□□□ -1.1
CHD4-212ENST00000545083 THSD4Q6ZMP0 1018 aa8.18□□□□□ -1.1
CHD4-212ENST00000545083 TMEM151AQ8N4L1 468 aa8.18□□□□□ -1.1
CHD4-212ENST00000545083 CDRT4Q8N9R6 151 aa8.18□□□□□ -1.1
CHD4-212ENST00000545083 ZNF527Q8NB42 609 aa8.18□□□□□ -1.1
CHD4-212ENST00000545083 NUP43Q8NFH3 380 aa8.18□□□□□ -1.1
CHD4-212ENST00000545083 KCNA7Q96RP8 456 aa8.18□□□□□ -1.1
CHD4-212ENST00000545083 QRSL1Q9H0R6 528 aaKnown RBP8.18□□□□□ -1.1
CHD4-212ENST00000545083 GIN1Q9NXP7 522 aa8.18□□□□□ -1.1
CHD4-212ENST00000545083 NFU1Q9UMS0 254 aa8.18□□□□□ -1.1
CHD4-212ENST00000545083 NOSIPQ9Y314 301 aaKnown RBP8.18□□□□□ -1.1
CHD4-212ENST00000545083 POLR3HQ9Y535 204 aaPredicted RBP8.18□□□□□ -1.1
CHD4-212ENST00000545083 TIMM22Q9Y584 194 aa8.18□□□□□ -1.1
CHD4-212ENST00000545083 ESPNB1AK53 854 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 B9A039 149 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 ETV2O00321 342 aaPredicted RBP8.17□□□□□ -1.1
CHD4-212ENST00000545083 IGFBP1P08833 259 aaPredicted RBP8.17□□□□□ -1.1
CHD4-212ENST00000545083 DAOP14920 347 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 TCP1P17987 556 aaKnown RBP8.17□□□□□ -1.1
CHD4-212ENST00000545083 HMOX2P30519 316 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 LCN1P31025 176 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 GSTM5P46439 218 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 SUMO3P55854 103 aaPredicted RBP8.17□□□□□ -1.1
CHD4-212ENST00000545083 GUCY2DQ02846 1103 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 CALCOCO2Q13137 446 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 RIN1Q13671 783 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 RASA2Q15283 850 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 ADIPOQQ15848 244 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 KLHL26Q53HC5 615 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 ZNF385BQ569K4 471 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 OR7E24Q6IFN5 339 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 ANKRD26P1Q6NSI1 321 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 LRIG3Q6UXM1 1119 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 TMPPEQ6ZT21 453 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 GPRIN3Q6ZVF9 776 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 SZRD1Q7Z422 152 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 SPATA19Q7Z5L4 167 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 ZCCHC24Q8N2G6 241 aaKnown RBP8.17□□□□□ -1.1
CHD4-212ENST00000545083 COX18Q8N8Q8 333 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 RFWD2Q8NHY2 731 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 METTL6Q8TCB7 284 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 ZNF418Q8TF45 676 aaPredicted RBP8.17□□□□□ -1.1
CHD4-212ENST00000545083 CIDECQ96AQ7 238 aaPredicted RBP8.17□□□□□ -1.1
CHD4-212ENST00000545083 EGLN2Q96KS0 407 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 ZNF382Q96SR6 550 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 ERP44Q9BS26 406 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 ZNF747Q9BV97 191 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 PLK3Q9H4B4 646 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 PCDHB10Q9UN67 800 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 NBEAL2Q6ZNJ1 2754 aa8.17□□□□□ -1.1
CHD4-212ENST00000545083 IGHV1-18A0A0C4DH31 117 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 LYNX1G3V0Z9 82 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 CCDC188H7C350 402 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 TRIM77I1YAP6 450 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 KLF11O14901 512 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 SNUPNO95149 360 aaKnown RBP8.16□□□□□ -1.1
CHD4-212ENST00000545083 OR4A8P0C604 315 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 LYNX1P0DP58 116 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 PPOXP50336 477 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 IDH3GP51553 393 aaPredicted RBP8.16□□□□□ -1.1
CHD4-212ENST00000545083 PLTPP55058 493 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 POU6F2P78424 691 aaPredicted RBP8.16□□□□□ -1.1
CHD4-212ENST00000545083 PDK3Q15120 406 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 QPRTQ15274 297 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 MIDNQ504T8 468 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 SPDYAQ5MJ70 313 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 C3orf33Q6P1S2 294 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 C1orf229Q6ZS94 237 aaPredicted RBP8.16□□□□□ -1.1
CHD4-212ENST00000545083 MTERF4Q7Z6M4 381 aaKnown RBP8.16□□□□□ -1.1
CHD4-212ENST00000545083 ZNF786Q8N393 782 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 SVOPLQ8N434 492 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 C17orf78Q8N4C9 275 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 TOR1AIP2Q8NFQ8 470 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 CEP70Q8NHQ1 597 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 DNAJA3Q96EY1 480 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 MS4A4EQ96PG1 132 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 TMEM237Q96Q45 408 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 MRPL57Q9BQC6 102 aaKnown RBP8.16□□□□□ -1.1
CHD4-212ENST00000545083 RBM4Q9BWF3 364 aaKnown RBP8.16□□□□□ -1.1
CHD4-212ENST00000545083 MRPL46Q9H2W6 279 aaKnown RBP8.16□□□□□ -1.1
CHD4-212ENST00000545083 LPAR2Q9HBW0 351 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 ESM1Q9NQ30 184 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 SLC7A10Q9NS82 523 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 CA10Q9NS85 328 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 EMC3Q9P0I2 261 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 AMDHD2Q9Y303 409 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 SPEF1Q9Y4P9 236 aa8.16□□□□□ -1.1
CHD4-212ENST00000545083 B4DSR2 109 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 NPIPB9F8W1W9 429 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 SULT2B1O00204 365 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 PDPK1O15530 556 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 RAD51CO43502 376 aa8.15□□□□□ -1.1
CHD4-212ENST00000545083 MRPL33O75394 65 aaKnown RBP8.15□□□□□ -1.1
CHD4-212ENST00000545083 SUPT7LO94864 414 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms