RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 YIF1BQ5BJH7 314 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 CCNJQ5T5M9 372 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 VASNQ6EMK4 673 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 RPL22L1Q6P5R6 122 aaKnown RBP12.05□□□□□ -0.48
CPSF7-223ENST00000544669 ARL9Q6T311 187 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 PARM1Q6UWI2 310 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 ZNF767PQ75MW2 155 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 SLC7A5P1Q8MH63 180 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 GPBAR1Q8TDU6 330 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 KISS1RQ969F8 398 aaPredicted RBP12.05□□□□□ -0.48
CPSF7-223ENST00000544669 RBM18Q96H35 190 aaKnown RBP12.05□□□□□ -0.48
CPSF7-223ENST00000544669 BMFQ96LC9 184 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 GDF15Q99988 308 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 TMEM168Q9H0V1 697 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 OR51V1Q9H2C8 321 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 DPAGT1Q9H3H5 408 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 ZCCHC4Q9H5U6 513 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 ERVMER34-1Q9H9K5 563 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 ISG20L2Q9H9L3 353 aaKnown RBP12.05□□□□□ -0.48
CPSF7-223ENST00000544669 ADGRL4Q9HBW9 690 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 RANGRFQ9HD47 186 aaPredicted RBP12.05□□□□□ -0.48
CPSF7-223ENST00000544669 EMC3Q9P0I2 261 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 NLKQ9UBE8 527 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 CPNE7Q9UBL6 633 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 NUBP2Q9Y5Y2 271 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 MYO10Q9HD67 2058 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 HEATR5BQ9P2D3 2071 aa12.05□□□□□ -0.48
CPSF7-223ENST00000544669 P2RX6O15547 441 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 GKN3PP0CG01 181 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 AHCYP23526 432 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 CD79BP40259 229 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 CAV3P56539 151 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 PRPS1P60891 318 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 PPP2CBP62714 309 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 PPP2CAP67775 309 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 MGAT2Q10469 447 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 FZD5Q13467 585 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 P2RY14Q15391 338 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 ACSM3Q53FZ2 586 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 ALG10BQ5I7T1 473 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 SLC22A10Q63ZE4 541 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 DPY19L2P2Q6ZN68 376 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 CREB3L2Q70SY1 520 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 KCTD20Q7Z5Y7 419 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 ZNF595Q8IYB9 648 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 EID2Q8N6I1 236 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 LRRC17Q8N6Y2 441 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 PFN4Q8NHR9 129 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 FAM3CQ92520 227 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 TSACCQ96A04 125 aaPredicted RBP12.04□□□□□ -0.48
CPSF7-223ENST00000544669 RNF170Q96K19 258 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 CNN2Q99439 309 aaKnown RBP12.04□□□□□ -0.48
CPSF7-223ENST00000544669 WACQ9BTA9 647 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 C8orf33Q9H7E9 229 aaPredicted RBP12.04□□□□□ -0.48
CPSF7-223ENST00000544669 Q9N2J8 555 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 HRASLS2Q9NWW9 162 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 ALG5Q9Y673 324 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 A0A1B0GWA3 101 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 A8MU76 341 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 PRAMEF26H0Y7S4 382 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 J3QLW9 94 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 ARPC3O15145 178 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 CTDSPLO15194 276 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 FLRT2O43155 660 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 PRAMEF2O60811 474 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 ARSBP15848 533 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 ZNF19P17023 458 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 SSTR4P31391 388 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 GALNSP34059 522 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 BLKP51451 505 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 MMP15P51511 669 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 CLDN2P57739 230 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 FXYD6P3P58550 94 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 CD83Q01151 205 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 THOC7Q6I9Y2 204 aaKnown RBP12.04□□□□□ -0.48
CPSF7-223ENST00000544669 LINC00114Q6XXX2 140 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 SPRED2Q7Z698 418 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 UBE2Q1Q7Z7E8 422 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 SLITRK4Q8IW52 837 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 GHDCQ8N2G8 530 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 TMEM99Q8N816 258 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 SAMD12Q8N8I0 201 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 OR13C2Q8NGS9 318 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 JPH3Q8WXH2 748 aaPredicted RBP12.04□□□□□ -0.48
CPSF7-223ENST00000544669 ADAMTS14Q8WXS8 1223 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 SGTBQ96EQ0 304 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 SENP5Q96HI0 755 aaPredicted RBP12.04□□□□□ -0.48
CPSF7-223ENST00000544669 C4orf36Q96KX1 117 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 DMRTB1Q96MA1 342 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 SEMA6CQ9H3T2 930 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 IGFLR1Q9H665 355 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 RANBP3Q9H6Z4 567 aaPredicted RBP12.04□□□□□ -0.48
CPSF7-223ENST00000544669 SYNPO2LQ9H987 977 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 ATP13A2Q9NQ11 1180 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 C20orf141Q9NUB4 165 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 CACNG2Q9Y698 323 aa12.04□□□□□ -0.48
CPSF7-223ENST00000544669 PRRC2BQ5JSZ5 2229 aaKnown RBP12.03□□□□□ -0.48
CPSF7-223ENST00000544669 PEX12O00623 359 aa12.03□□□□□ -0.48
CPSF7-223ENST00000544669 CTNSO60931 367 aa12.03□□□□□ -0.48
CPSF7-223ENST00000544669 FZD7O75084 574 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms