RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 RPL3LQ92901 407 aaKnown RBP2.97□□□□□ -1.93
SCFD1-207ENST00000544052 DYNLL2Q96FJ2 89 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 AKR1E2Q96JD6 320 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 ZNF607Q96SK3 696 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 GNB4Q9HAV0 340 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 ABCC13Q9NSE7 274 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 SMPD3Q9NY59 655 aaPredicted RBP2.97□□□□□ -1.93
SCFD1-207ENST00000544052 CIDEBQ9UHD4 219 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 DUSP12Q9UNI6 340 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 RNF24Q9Y225 148 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 DOCK5Q9H7D0 1870 aa2.97□□□□□ -1.93
SCFD1-207ENST00000544052 TET1Q8NFU7 2136 aa2.96□□□□□ -1.93
SCFD1-207ENST00000544052 TANC1Q9C0D5 1861 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 MUC3AQ02505 3323 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 ESYT2A0FGR8 921 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 ZSCAN5BA6NJL1 495 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 CTAGE5O15320 804 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 LRRTM2O43300 516 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 TPM2P07951 284 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 MELTFP08582 738 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 ARHGDIAP52565 204 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 ERVK11-1P61568 191 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 UBE2HP62256 183 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 PJVKQ0ZLH3 352 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 ZIC1Q15915 447 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 LRRC26Q2I0M4 334 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 MRGPRG-AS1Q2M3A8 158 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 ATAD3BQ5T9A4 648 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 KDELC1Q6UW63 502 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 TMEM184AQ6ZMB5 413 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 GPRIN3Q6ZVF9 776 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 FLVCR1-AS1Q8TAF5 88 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 ZNF606Q8WXB4 792 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 ALG12Q9BV10 488 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 NFKBIZQ9BYH8 718 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 HEXA-AS1Q9H8Q6 139 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 MYH7BA7E2Y1 1941 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 CUL9Q8IWT3 2517 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 PCNX3Q9H6A9 2034 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 TRABD2BA6NFA1 517 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 PPIAL4DF5H284 164 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 TM9SF1O15321 606 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 STX7O15400 261 aaKnown RBP2.96□□□□□ -1.94
SCFD1-207ENST00000544052 SPAG6O75602 509 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 JCHAINP01591 159 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 MT-ND1P03886 318 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 CYBAP13498 195 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 CPN1P15169 458 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 IDSP22304 550 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 GLRA2P23416 452 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 HOXD10P28358 340 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 NOVA1P51513 510 aaKnown RBP2.96□□□□□ -1.94
SCFD1-207ENST00000544052 ACTR1AP61163 376 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 OSTNP61366 133 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 PLOD1Q02809 727 aaPredicted RBP2.96□□□□□ -1.94
SCFD1-207ENST00000544052 FCHO2Q0JRZ9 810 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 NHLRC3Q5JS37 347 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 CEP85LQ5SZL2 805 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 CELF3Q5SZQ8 465 aaKnown RBP2.96□□□□□ -1.94
SCFD1-207ENST00000544052 PAQR6Q6TCH4 344 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 PARGQ86W56 976 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 FAM133AQ8N9E0 248 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 CNIH3Q8TBE1 160 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 FNDC8Q8TC99 324 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 SLC5A11Q8WWX8 675 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 ZNF689Q96CS4 500 aaPredicted RBP2.96□□□□□ -1.94
SCFD1-207ENST00000544052 PIWIL1Q96J94 861 aaKnown RBP2.96□□□□□ -1.94
SCFD1-207ENST00000544052 EDEM2Q9BV94 578 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 TRIM9Q9C026 710 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 POLR1EQ9GZS1 481 aaKnown RBP2.96□□□□□ -1.94
SCFD1-207ENST00000544052 COMMD4Q9H0A8 199 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 POLR3FQ9H1D9 316 aaPredicted RBP2.96□□□□□ -1.94
SCFD1-207ENST00000544052 ARMCX1Q9P291 453 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 RABL2AQ9UBK7 228 aaPredicted RBP2.96□□□□□ -1.94
SCFD1-207ENST00000544052 PRODH2Q9UF12 536 aa2.96□□□□□ -1.94
SCFD1-207ENST00000544052 NAP1L2Q9ULW6 460 aaPredicted RBP2.96□□□□□ -1.94
SCFD1-207ENST00000544052 MRPL11Q9Y3B7 192 aaKnown RBP2.96□□□□□ -1.94
SCFD1-207ENST00000544052 SIP14410 1827 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 COL4A4P53420 1690 aaPredicted RBP2.95□□□□□ -1.94
SCFD1-207ENST00000544052 SCN10AQ9Y5Y9 1956 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 IGHV3OR16-12A0A075B7B8 117 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 GSAPA4D1B5 854 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 CCT8L1PA6NM43 557 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 E9PQ18 207 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 MAGEB3O15480 346 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 PI15O43692 258 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 STX11O75558 287 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 KIAA0754O94854 1291 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 RENP00797 406 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 IGFBP1P08833 259 aaPredicted RBP2.95□□□□□ -1.94
SCFD1-207ENST00000544052 PDHBP11177 359 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 RPL4P36578 427 aaKnown RBP2.95□□□□□ -1.94
SCFD1-207ENST00000544052 BDKRB1P46663 353 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 IRX3P78415 501 aaPredicted RBP2.95□□□□□ -1.94
SCFD1-207ENST00000544052 IL9RQ01113 521 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 CHIT1Q13231 466 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 CRMP1Q14194 572 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 LTB4RQ15722 352 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 CNPY1Q3B7I2 92 aa2.95□□□□□ -1.94
SCFD1-207ENST00000544052 SNAI3Q3KNW1 292 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms