RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 TMEM229AB2RXF0 380 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 H3BML4 177 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 PYCARD-AS1I3L0S3 204 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 LINC01387J3KSC0 135 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 M0R3H8 397 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 ETV2O00321 342 aaPredicted RBP12.31□□□□□ -0.44
SP140-213ENST00000543928 BCKDKO14874 412 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 NTN1O95631 604 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 ZNF682O95780 498 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 SERPINA1P01009 418 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 TPOP07202 933 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 PLA2G2AP14555 144 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 ME2P23368 584 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 ADH6P28332 368 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 RASSF2P50749 326 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 ZNF136P52737 540 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 COPZ1P61923 177 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 SELENOWP63302 87 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 MERTKQ12866 999 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 BNIP2Q12982 314 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 NRF1Q16656 503 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 SLC25A53Q5H9E4 307 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 WLSQ5T9L3 541 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 ENPP6Q6UWR7 440 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 CCDC121Q6ZUS5 278 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 CD163Q86VB7 1156 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 CADM2Q8N3J6 435 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 OR10Q1Q8NGQ4 319 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 VANGL1Q8TAA9 524 aaPredicted RBP12.31□□□□□ -0.44
SP140-213ENST00000543928 LZICQ8WZA0 190 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 TPD52L3Q96J77 140 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 ARHGDIGQ99819 225 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 EVA1AQ9H8M9 152 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 ADPRHL2Q9NX46 363 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 MAGEL2Q9UJ55 1249 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 OSGIN2Q9Y236 505 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 ZNF835Q9Y2P0 537 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 SH3GLB1Q9Y371 365 aa12.31□□□□□ -0.44
SP140-213ENST00000543928 PRRG2O14669 202 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 ARPC2O15144 300 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 EFNA2O43921 213 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 DNAJC8O75937 253 aaPredicted RBP12.3□□□□□ -0.44
SP140-213ENST00000543928 PEPDP12955 493 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 ZNF708P17019 499 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 POU3F2P20265 443 aaPredicted RBP12.3□□□□□ -0.44
SP140-213ENST00000543928 TNFRSF1BP20333 461 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 IL11P20809 199 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 HTR2AP28223 471 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 ELK4P28324 431 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 SLC1A3P43003 542 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 LHX2P50458 406 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 DLX5P56178 289 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 CLDN18P56856 261 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 NCALDP61601 193 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 C3AR1Q16581 482 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 EIF2S3LQ2VIR3 472 aaKnown RBP12.3□□□□□ -0.44
SP140-213ENST00000543928 GXYLT1Q4G148 440 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 EMC4Q5J8M3 183 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 WBP2NLQ6ICG8 309 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 POMZP3Q6PJE2 187 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 Q6ZPB1 254 aaPredicted RBP12.3□□□□□ -0.44
SP140-213ENST00000543928 PLEKHM3Q6ZWE6 761 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 CBLL1Q75N03 491 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 GRINAQ7Z429 371 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 LACC1Q8IV20 430 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 OR52E4Q8NGH9 312 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 OR4D11Q8NGI4 311 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 OR6T1Q8NGN1 323 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 OR5M9Q8NGP3 310 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 SMPDL3BQ92485 455 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 WDYHV1Q96HA8 205 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 PRR14Q9BWN1 585 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 TMEM185BQ9H7F4 350 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 GORASP2Q9H8Y8 452 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 PNPLA3Q9NST1 481 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 ALKBH4Q9NXW9 302 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 TESQ9UGI8 421 aaKnown RBP12.3□□□□□ -0.44
SP140-213ENST00000543928 CAMK2AQ9UQM7 478 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 SLC9A8Q9Y2E8 581 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 AP4B1Q9Y6B7 739 aa12.3□□□□□ -0.44
SP140-213ENST00000543928 TRGV8A0A0C4DH27 118 aa12.29□□□□□ -0.44
SP140-213ENST00000543928 GSC2O15499 205 aa12.29□□□□□ -0.44
SP140-213ENST00000543928 TPST2O60704 377 aa12.29□□□□□ -0.44
SP140-213ENST00000543928 TACR3P29371 465 aa12.29□□□□□ -0.44
SP140-213ENST00000543928 APOBEC1P41238 236 aaKnown RBP12.29□□□□□ -0.44
SP140-213ENST00000543928 HTR3AP46098 478 aa12.29□□□□□ -0.44
SP140-213ENST00000543928 SRYQ05066 204 aa12.29□□□□□ -0.44
SP140-213ENST00000543928 SELENBP1Q13228 472 aa12.29□□□□□ -0.44
SP140-213ENST00000543928 TRIM25Q14258 630 aaKnown RBP12.29□□□□□ -0.44
SP140-213ENST00000543928 NPTX1Q15818 432 aa12.29□□□□□ -0.44
SP140-213ENST00000543928 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.29□□□□□ -0.44
SP140-213ENST00000543928 ZNF585AQ6P3V2 769 aa12.29□□□□□ -0.44
SP140-213ENST00000543928 VTCN1Q7Z7D3 282 aa12.29□□□□□ -0.44
SP140-213ENST00000543928 RANBP3LQ86VV4 465 aaPredicted RBP12.29□□□□□ -0.44
SP140-213ENST00000543928 CARM1Q86X55 608 aa12.29□□□□□ -0.44
SP140-213ENST00000543928 RBM45Q8IUH3 476 aaKnown RBP12.29□□□□□ -0.44
SP140-213ENST00000543928 UBQLNLQ8IYU4 475 aa12.29□□□□□ -0.44
SP140-213ENST00000543928 ATP6V1C2Q8NEY4 427 aa12.29□□□□□ -0.44
SP140-213ENST00000543928 PRR7Q8TB68 274 aa12.29□□□□□ -0.44
SP140-213ENST00000543928 CCDC124Q96CT7 223 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms