RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 C6orf203Q9P0P8 240 aaPredicted RBP11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 EMC9Q9Y3B6 208 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 WDR45Q9Y484 360 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 CLDN24A6NM45 220 aa11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 GJE1A6NN92 205 aa11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 CASKO14936 926 aa11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 SLC22A3O75751 556 aa11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 CSTAP01040 98 aa11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 RAF1P04049 648 aa11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 GSNP06396 782 aa11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 CHRM4P08173 479 aa11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 UBTFL6P0CB48 400 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 CD53P19397 219 aa11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 KLK2P20151 261 aa11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ENPP1P22413 925 aa11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 KHKP50053 298 aa11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 CTBP2P56545 445 aa11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 RAC3P60763 192 aa11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 SELENBP1Q13228 472 aa11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ATAD3BQ5T9A4 648 aa11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ANKRD34AQ69YU3 496 aa11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 PPP4R4Q6NUP7 873 aa11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 NUFIP2Q7Z417 695 aaKnown RBP11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 HMGN2P46Q86SG4 172 aa11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ANKFN1Q8N957 763 aa11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ATP6V1C2Q8NEY4 427 aa11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 PIWIL2Q8TC59 973 aaKnown RBP11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 CPNE4Q96A23 557 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 TRNT1Q96Q11 434 aaKnown RBP11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ALPK1Q96QP1 1244 aa11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 PANX1Q96RD7 426 aa11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 SLC38A1Q9H2H9 487 aa11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 TIGARQ9NQ88 270 aa11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 SDR39U1Q9NRG7 319 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 RAI1Q7Z5J4 1906 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF1A-215ENST00000543359 A0A1W2PNR3 127 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 KLF4O43474 513 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 GCM2O75603 506 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 CYP7B1O75881 506 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 PLGP00747 810 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 PABPC4LP0CB38 370 aaKnown RBP11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 IDO1P14902 403 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 RPS4Y1P22090 263 aaKnown RBP11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 CHI3L1P36222 383 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 KCNJ5P48544 419 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 CCR4P51679 360 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 KCNJ10P78508 379 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 LRRC74AQ0VAA2 488 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 RNPS1Q15287 305 aaKnown RBP11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 EXOC3L2Q2M3D2 409 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 GTF2IRD2BQ6EKJ0 949 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 EPGNQ6UW88 154 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 LRRC74BQ6ZQY2 392 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ZNF621Q6ZSS3 439 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 PLEKHM3Q6ZWE6 761 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 FCRLAQ7L513 359 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 GTF2IRD2Q86UP8 949 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 LSRQ86X29 649 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 CXorf67Q86X51 503 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 TGIF2LYQ8IUE0 185 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 KRTAP1-3Q8IUG1 177 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 TUSC5Q8IXB3 177 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 GABRG1Q8N1C3 465 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 TMCO5AQ8N6Q1 288 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 OR9I1Q8NGQ6 314 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 CNOT9Q92600 299 aaKnown RBP11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 HS3ST6Q96QI5 342 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 MED18Q9BUE0 208 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 CCDC106Q9BWC9 280 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 KLHL4Q9C0H6 718 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 BCO1Q9HAY6 547 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 GP6Q9HCN6 339 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 EXOSC3Q9NQT5 275 aaKnown RBP11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ZNF226Q9NYT6 803 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ZIM2Q9NZV7 527 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 KLHL13Q9P2N7 655 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 LIPT1Q9Y234 373 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 SLC35A3Q9Y2D2 325 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ANK3Q12955 4377 aaKnown RBP11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 CADP27708 2225 aa11.67□□□□□ -0.54
TNFRSF1A-215ENST00000543359 TLN2Q9Y4G6 2542 aa11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 IGHV3-15A0A0B4J1V0 119 aa11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 AGAP5A6NIR3 686 aa11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 SMAD9O15198 467 aaKnown RBP11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 PRKD3O94806 890 aa11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 IL6P05231 212 aa11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 YES1P07947 543 aa11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 PGCP20142 388 aa11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 EDNRAP25101 427 aa11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 MRPL19P49406 292 aaKnown RBP11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ADAM8P78325 824 aa11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 TXNL4AP83876 142 aaKnown RBP11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 MERTKQ12866 999 aa11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 GSTA3Q16772 222 aa11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 DEFB113Q30KQ7 82 aa11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 GPAT3Q53EU6 434 aa11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 FBXW10Q5XX13 1052 aa11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 NXNQ6DKJ4 435 aa11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 TFAP2EQ6VUC0 442 aa11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 TMPPEQ6ZT21 453 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms