RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 MARCH9Q86YJ5 346 aa10.52□□□□□ -0.73
CDH4-201ENST00000543233 SIAH3Q8IW03 269 aa10.52□□□□□ -0.73
CDH4-201ENST00000543233 SKA3Q8IX90 412 aa10.52□□□□□ -0.73
CDH4-201ENST00000543233 CLECL1Q8IZS7 167 aa10.52□□□□□ -0.73
CDH4-201ENST00000543233 LGI4Q8N135 537 aa10.52□□□□□ -0.73
CDH4-201ENST00000543233 SAMD12Q8N8I0 201 aa10.52□□□□□ -0.73
CDH4-201ENST00000543233 VOPP1Q96AW1 172 aa10.52□□□□□ -0.73
CDH4-201ENST00000543233 SLC38A1Q9H2H9 487 aa10.52□□□□□ -0.73
CDH4-201ENST00000543233 FN3KQ9H479 309 aa10.52□□□□□ -0.73
CDH4-201ENST00000543233 MVB12BQ9H7P6 319 aa10.52□□□□□ -0.73
CDH4-201ENST00000543233 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.52□□□□□ -0.73
CDH4-201ENST00000543233 ZNF629Q9UEG4 869 aaPredicted RBP10.52□□□□□ -0.73
CDH4-201ENST00000543233 HS3ST2Q9Y278 367 aa10.52□□□□□ -0.73
CDH4-201ENST00000543233 AGAP14A8MT82 685 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 FAM220BPB1ANY3 271 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 ARNTLO00327 626 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 KIAA0355O15063 1070 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 GNSP15586 552 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 AHCYP23526 432 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 CNR2P34972 360 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 PPM1AP35813 382 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 VIPR2P41587 438 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 KIAA0040Q15053 153 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 ADIPOR2Q86V24 386 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 SLITRK4Q8IW52 837 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 TMEM159Q96B96 161 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 SENP5Q96HI0 755 aaPredicted RBP10.51□□□□□ -0.73
CDH4-201ENST00000543233 AMDHD1Q96NU7 426 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 PANX1Q96RD7 426 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 NRTNQ99748 197 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 ATF6BQ99941 703 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 DUSP26Q9BV47 211 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 MRPL37Q9BZE1 423 aaKnown RBP10.51□□□□□ -0.73
CDH4-201ENST00000543233 CERS4Q9HA82 394 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 SPHK2Q9NRA0 654 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 METTL1Q9UBP6 276 aaKnown RBP10.51□□□□□ -0.73
CDH4-201ENST00000543233 NEUROG3Q9Y4Z2 214 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 C2orf92A0A1B0GVN3 265 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 C9orf170A2RU37 121 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 PMP2P02689 132 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 CTSLP07711 333 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 CRATP43155 626 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 PPIGQ13427 754 aaKnown RBP eCLIP10.51□□□□□ -0.73
CDH4-201ENST00000543233 TGIF1Q15583 401 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 CDNFQ49AH0 187 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 IER5LQ5T953 404 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 LYPLAL1Q5VWZ2 237 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 FRG2Q64ET8 278 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 B3GNTL1Q67FW5 361 aaPredicted RBP10.51□□□□□ -0.73
CDH4-201ENST00000543233 PGBD2Q6P3X8 592 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 TRAPPC5Q8IUR0 188 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 NAXDQ8IW45 347 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 CPXM2Q8N436 756 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 ASB11Q8WXH4 323 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 C3orf49Q96BT1 292 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 FRG2BQ96QU4 278 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 METTL9Q9H1A3 318 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 TLNRD1Q9H1K6 362 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 TCF7L1Q9HCS4 588 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 CNOT2Q9NZN8 540 aaKnown RBP10.51□□□□□ -0.73
CDH4-201ENST00000543233 SNX11Q9Y5W9 270 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 PLXNA4Q9HCM2 1894 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 NUMA1Q14980 2115 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 COL4A6Q14031 1691 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 LILRB3O75022 631 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 ELFN1P0C7U0 828 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 ADRB3P13945 408 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 COX7A2P14406 83 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 CNR1P21554 472 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 MLLT11Q13015 90 aaPredicted RBP10.51□□□□□ -0.73
CDH4-201ENST00000543233 MAD2L1Q13257 205 aaPredicted RBP10.51□□□□□ -0.73
CDH4-201ENST00000543233 TCEA2Q15560 299 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 PYY3Q5JQD4 70 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 OR2G6Q5TZ20 316 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 TMEM220Q6QAJ8 160 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 MISPQ8IVT2 679 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 SFTPA1Q8IWL2 248 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 NEIL3Q8TAT5 605 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 RAB3CQ96E17 227 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 GAL3ST4Q96RP7 486 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 POFUT2Q9Y2G5 429 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 MMACHCQ9Y4U1 282 aa10.51□□□□□ -0.73
CDH4-201ENST00000543233 REV3LO60673 3130 aa10.5□□□□□ -0.73
CDH4-201ENST00000543233 GBF1Q92538 1859 aa10.5□□□□□ -0.73
CDH4-201ENST00000543233 GNG14A0A1W2PPG7 69 aa10.5□□□□□ -0.73
CDH4-201ENST00000543233 TXNDC12O95881 172 aa10.5□□□□□ -0.73
CDH4-201ENST00000543233 SLC16A8O95907 504 aa10.5□□□□□ -0.73
CDH4-201ENST00000543233 OR8U8P0C7N1 319 aa10.5□□□□□ -0.73
CDH4-201ENST00000543233 TFPIP10646 304 aa10.5□□□□□ -0.73
CDH4-201ENST00000543233 ADCYAP1P18509 176 aa10.5□□□□□ -0.73
CDH4-201ENST00000543233 CD22P20273 847 aa10.5□□□□□ -0.73
CDH4-201ENST00000543233 RAB4AP20338 218 aa10.5□□□□□ -0.73
CDH4-201ENST00000543233 POLR2LP62875 67 aaKnown RBP10.5□□□□□ -0.73
CDH4-201ENST00000543233 PTGES3Q15185 160 aaKnown RBP10.5□□□□□ -0.73
CDH4-201ENST00000543233 THEM4Q5T1C6 240 aa10.5□□□□□ -0.73
CDH4-201ENST00000543233 LILRA6Q6PI73 481 aa10.5□□□□□ -0.73
CDH4-201ENST00000543233 C11orf88Q6PI97 169 aa10.5□□□□□ -0.73
CDH4-201ENST00000543233 CLEC2AQ6UVW9 174 aa10.5□□□□□ -0.73
CDH4-201ENST00000543233 ZNF551Q7Z340 670 aaPredicted RBP10.5□□□□□ -0.73
CDH4-201ENST00000543233 CBARPQ8N350 705 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms