RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 CYSRT1A8MQ03 144 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 A8MUI8 341 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 TEX22C9J3V5 150 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 E9PBE3 544 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 GPRIN2O60269 458 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 TBX19O60806 448 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 E2F6O75461 281 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 ZFAND5O76080 213 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 PRSS23O95084 383 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 ALDOCP09972 364 aaKnown RBP4.69□□□□□ -1.66
CLIP1-217ENST00000543205 AHCYP23526 432 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 STX1BP61266 288 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 GNGT1P63211 74 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 PDE7AQ13946 482 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 GSTA3Q16772 222 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 IGSF11Q5DX21 431 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 LCE5AQ5TCM9 118 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 HSDL2Q6YN16 418 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 DGAT2L6Q6ZPD8 337 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 SLC5A8Q8N695 610 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 KRTCAP2Q8N6L1 136 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 NATD1Q8N6N6 113 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 SIRT6Q8N6T7 355 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 PIK3C3Q8NEB9 887 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 NFAM1Q8NET5 270 aaPredicted RBP4.69□□□□□ -1.66
CLIP1-217ENST00000543205 FDCSPQ8NFU4 85 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 OR5AN1Q8NGI8 311 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 ZFP28Q8NHY6 868 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 C9orf43Q8TAL5 461 aaPredicted RBP4.69□□□□□ -1.66
CLIP1-217ENST00000543205 SUN5Q8TC36 379 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 ELP5Q8TE02 316 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 DOK4Q8TEW6 326 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 ZNF721Q8TF20 911 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 CIDECQ96AQ7 238 aaPredicted RBP4.69□□□□□ -1.66
CLIP1-217ENST00000543205 ZBED6CLQ96FA7 236 aaPredicted RBP4.69□□□□□ -1.66
CLIP1-217ENST00000543205 MARK4Q96L34 752 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 ZNF681Q96N22 645 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 GAL3ST4Q96RP7 486 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 BCL7BQ9BQE9 202 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 DEFB126Q9BYW3 111 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 ADNPQ9H2P0 1102 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 CXorf21Q9HAI6 301 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 BARX1Q9HBU1 254 aaPredicted RBP4.69□□□□□ -1.66
CLIP1-217ENST00000543205 AIG1Q9NVV5 245 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 ALKBH4Q9NXW9 302 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 PTGFRNQ9P2B2 879 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 HSPB7Q9UBY9 170 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 TEKT2Q9UIF3 430 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 PLA2G2DQ9UNK4 145 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 EXO1Q9UQ84 846 aaKnown RBP4.69□□□□□ -1.66
CLIP1-217ENST00000543205 ERVK-19Q9WJR5 959 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 CHTOPQ9Y3Y2 248 aaKnown RBP4.69□□□□□ -1.66
CLIP1-217ENST00000543205 CFAP46Q8IYW2 2715 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 CCDC88CQ9P219 2028 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 NUP210LQ5VU65 1888 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 CFLARO15519 480 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 KALRNO60229 2985 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 NME6O75414 186 aaPredicted RBP4.68□□□□□ -1.66
CLIP1-217ENST00000543205 CEACAM4O75871 244 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 SCAF4O95104 1147 aaKnown RBP4.68□□□□□ -1.66
CLIP1-217ENST00000543205 LAMP1P11279 417 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 CDH2P19022 906 aaPredicted RBP4.68□□□□□ -1.66
CLIP1-217ENST00000543205 NCF2P19878 526 aaPredicted RBP4.68□□□□□ -1.66
CLIP1-217ENST00000543205 PTGER1P34995 402 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 ETV1P50549 477 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 GPR143P51810 404 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 DUSP2Q05923 314 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 HSPB3Q12988 150 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 LTB4RQ15722 352 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 CEBPEQ15744 281 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 MEP1AQ16819 746 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 ZIK1Q3SY52 487 aaPredicted RBP4.68□□□□□ -1.66
CLIP1-217ENST00000543205 KCTD21Q4G0X4 260 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 PDCD4Q53EL6 469 aaKnown RBP4.68□□□□□ -1.66
CLIP1-217ENST00000543205 ZNF385BQ569K4 471 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 ABHD17BQ5VST6 288 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 TMEM198Q66K66 360 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 MSANTD1Q6ZTZ1 278 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 SLC29A4Q7RTT9 530 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 RIMKLAQ8IXN7 391 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 KIF2BQ8N4N8 673 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 AMER2Q8N7J2 671 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 ZNF321PQ8N8H1 164 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 APCDD1LQ8NCL9 501 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 OR7G1Q8NGA0 311 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 OR5L2Q8NGL0 311 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 OR9A2Q8NGT5 310 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 ZNF675Q8TD23 568 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 RNASE8Q8TDE3 154 aaKnown RBP4.68□□□□□ -1.66
CLIP1-217ENST00000543205 ROBO4Q8WZ75 1007 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 TM9SF4Q92544 642 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 TESCQ96BS2 214 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 COQ8BQ96D53 544 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 ELMOD3Q96FG2 381 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 FBXL20Q96IG2 436 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 MAGED4Q96JG8 741 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 SAMD8Q96LT4 415 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 ZNF354BQ96LW1 612 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 AMDHD1Q96NU7 426 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 ZNF317Q96PQ6 595 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms