RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 TMEM234Q8WY98 164 aa15.43■□□□□ 0.06
PPP1CA-210ENST00000542876 ST8SIA1Q92185 356 aa15.43■□□□□ 0.06
PPP1CA-210ENST00000542876 TUBGCP3Q96CW5 907 aa15.43■□□□□ 0.06
PPP1CA-210ENST00000542876 SDF2Q99470 211 aa15.43■□□□□ 0.06
PPP1CA-210ENST00000542876 THUMPD3Q9BV44 507 aaKnown RBP15.43■□□□□ 0.06
PPP1CA-210ENST00000542876 DUSP26Q9BV47 211 aa15.43■□□□□ 0.06
PPP1CA-210ENST00000542876 MECRQ9BV79 373 aa15.43■□□□□ 0.06
PPP1CA-210ENST00000542876 TRIM2Q9C040 744 aa15.43■□□□□ 0.06
PPP1CA-210ENST00000542876 NMUR2Q9GZQ4 415 aa15.43■□□□□ 0.06
PPP1CA-210ENST00000542876 CISD1Q9NZ45 108 aaKnown RBP15.43■□□□□ 0.06
PPP1CA-210ENST00000542876 PRSS50Q9UI38 385 aa15.43■□□□□ 0.06
PPP1CA-210ENST00000542876 DPRXA6NFQ7 191 aa15.42■□□□□ 0.06
PPP1CA-210ENST00000542876 ZNF724A8MTY0 619 aa15.42■□□□□ 0.06
PPP1CA-210ENST00000542876 C9JVG2 144 aa15.42■□□□□ 0.06
PPP1CA-210ENST00000542876 SMAD9O15198 467 aaKnown RBP15.42■□□□□ 0.06
PPP1CA-210ENST00000542876 CYTIPO60759 359 aa15.42■□□□□ 0.06
PPP1CA-210ENST00000542876 STX11O75558 287 aa15.42■□□□□ 0.06
PPP1CA-210ENST00000542876 SKAP2O75563 359 aaPredicted RBP15.42■□□□□ 0.06
PPP1CA-210ENST00000542876 GGT1P19440 569 aa15.42■□□□□ 0.06
PPP1CA-210ENST00000542876 MATN1P21941 496 aa15.42■□□□□ 0.06
PPP1CA-210ENST00000542876 CSNK2A1P68400 391 aaPredicted RBP15.42■□□□□ 0.06
PPP1CA-210ENST00000542876 PGGHGQ32M88 737 aa15.42■□□□□ 0.06
PPP1CA-210ENST00000542876 ZCCHC23Q6ZST2 131 aa15.42■□□□□ 0.06
PPP1CA-210ENST00000542876 ATG4DQ86TL0 474 aaPredicted RBP15.42■□□□□ 0.06
PPP1CA-210ENST00000542876 P2RY8Q86VZ1 359 aa15.42■□□□□ 0.06
PPP1CA-210ENST00000542876 RIBC1Q8N443 379 aaPredicted RBP15.42■□□□□ 0.06
PPP1CA-210ENST00000542876 ZNF775Q96BV0 537 aaPredicted RBP15.42■□□□□ 0.06
PPP1CA-210ENST00000542876 LAT2Q9GZY6 243 aa15.42■□□□□ 0.06
PPP1CA-210ENST00000542876 EMC3Q9P0I2 261 aa15.42■□□□□ 0.06
PPP1CA-210ENST00000542876 SPIN1Q9Y657 262 aaPredicted RBP15.42■□□□□ 0.06
PPP1CA-210ENST00000542876 COL6A5A8TX70 2615 aa15.42■□□□□ 0.06
PPP1CA-210ENST00000542876 PRR14LQ5THK1 2151 aa15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 SONP18583 2426 aaKnown RBP15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 SULT2B1O00204 365 aa15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 ETV2O00321 342 aaPredicted RBP15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 TLX2O43763 284 aaPredicted RBP15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 CSTAP01040 98 aa15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 IGHV4-39P01824 125 aa15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 PGCP20142 388 aa15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 CDH11P55287 796 aa15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 HBA1P69905 142 aa15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 KRTAP1-1Q07627 177 aa15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 MERTKQ12866 999 aa15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 PGS1Q32NB8 556 aa15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 TIMM23BQ5SRD1 257 aa15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 AGAP6Q5VW22 663 aa15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 EIF3MQ7L2H7 374 aaKnown RBP15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 C16orf62Q7Z3J2 963 aa15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 C6orf120Q7Z4R8 191 aa15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 UBE2J2Q8N2K1 259 aa15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 SLC25A43Q8WUT9 341 aaPredicted RBP15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.41■□□□□ 0.062e-7■■■■■ 64.2
PPP1CA-210ENST00000542876 ZHX1-C8orf76Q96EF9 292 aa15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 RADILQ96JH8 1075 aa15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 C3orf30Q96M34 536 aa15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 ZNF300Q96RE9 604 aaPredicted RBP15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 TRAF4Q9BUZ4 470 aaPredicted RBP15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 QRSL1Q9H0R6 528 aaKnown RBP15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 EXD2Q9NVH0 621 aa15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 SLC17A7Q9P2U7 560 aa15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 ING1Q9UK53 422 aaPredicted RBP15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 PCDHGB4Q9UN71 923 aa15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 FBN3Q75N90 2809 aa15.41■□□□□ 0.06
PPP1CA-210ENST00000542876 ESPNB1AK53 854 aa15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 ABCD4O14678 606 aa15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 RAMP1O60894 148 aa15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 SPAG7O75391 227 aa15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 H6PDO95479 791 aa15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 IFNA2P01563 188 aa15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 UBTFL6P0CB48 400 aaPredicted RBP15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 TFPIP10646 304 aa15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 DIO1P49895 249 aa15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 SESN3P58005 492 aa15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 C21orf58P58505 322 aa15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 RPS26P62854 115 aaKnown RBP15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 SKP2Q13309 424 aa15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 ZNF141Q15928 474 aa15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 NRF1Q16656 503 aa15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 SYT14P1Q58G82 188 aa15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 SEZ6L2Q6UXD5 910 aa15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 TMPPEQ6ZT21 453 aa15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 RIMKLAQ8IXN7 391 aa15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 TRIM44Q96DX7 344 aaPredicted RBP15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 SLC35G5Q96KT7 338 aa15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 RHNO1Q9BSD3 238 aa15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 REPIN1Q9BWE0 567 aaKnown RBP15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 GRIP2Q9C0E4 1043 aa15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 YAE1D1Q9NRH1 226 aa15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 MKLN1Q9UL63 735 aa15.4■□□□□ 0.06
PPP1CA-210ENST00000542876 RNF103-CHMP3A0A140T963 221 aa15.39■□□□□ 0.05
PPP1CA-210ENST00000542876 CIB4A0PJX0 185 aa15.39■□□□□ 0.05
PPP1CA-210ENST00000542876 OR5H1A6NKK0 313 aa15.39■□□□□ 0.05
PPP1CA-210ENST00000542876 CD5LO43866 347 aa15.39■□□□□ 0.05
PPP1CA-210ENST00000542876 ADAM11O75078 769 aa15.39■□□□□ 0.05
PPP1CA-210ENST00000542876 AGR2O95994 175 aa15.39■□□□□ 0.05
PPP1CA-210ENST00000542876 G6PDP11413 515 aa15.39■□□□□ 0.05
PPP1CA-210ENST00000542876 COX5AP20674 150 aa15.39■□□□□ 0.05
PPP1CA-210ENST00000542876 IGHV1-2P23083 117 aa15.39■□□□□ 0.05
PPP1CA-210ENST00000542876 IFFO1Q0D2I5 559 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms