RNA–Protein interactions for RNA: ENST00000542484.1

C2CD3-218, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-218ENST00000542484 HERVK_113P63132 956 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 RPL24P83731 157 aaKnown RBP4.09□□□□□ -1.75
C2CD3-218ENST00000542484 CSTF1Q05048 431 aaKnown RBP4.09□□□□□ -1.75
C2CD3-218ENST00000542484 CD47Q08722 323 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 EXOSC2Q13868 293 aaKnown RBP4.09□□□□□ -1.75
C2CD3-218ENST00000542484 DPYSL3Q14195 570 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 FASTKQ14296 549 aaKnown RBP4.09□□□□□ -1.75
C2CD3-218ENST00000542484 KIR2DS5Q14953 304 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 EMC2Q15006 297 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 TRAM2Q15035 370 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 SSX2Q16385 188 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 RNF212Q495C1 297 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 CBWD6Q4V339 395 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 C2CD6Q53TS8 623 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 CBWD3Q5JTY5 395 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 HECTD3Q5T447 861 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 ZNF691Q5VV52 312 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 DHRS7BQ6IAN0 325 aaPredicted RBP4.09□□□□□ -1.75
C2CD3-218ENST00000542484 GLYATQ6IB77 296 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 BHLHB9Q6PI77 547 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 CNSTQ6PJW8 725 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 PLET1Q6UQ28 207 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 SUSD1Q6UWL2 747 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 RTL4Q6ZR62 310 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 PGAP1Q75T13 922 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 HSD17B13Q7Z5P4 300 aaPredicted RBP4.09□□□□□ -1.75
C2CD3-218ENST00000542484 LDB1Q86U70 411 aaPredicted RBP4.09□□□□□ -1.75
C2CD3-218ENST00000542484 LHFPL3Q86UP9 236 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 RNF130Q86XS8 419 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 SVOPLQ8N434 492 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 GBGT1Q8N5D6 347 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 MINDY1Q8N5J2 469 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 GOT1L1Q8NHS2 421 aaPredicted RBP4.09□□□□□ -1.75
C2CD3-218ENST00000542484 MAPK15Q8TD08 544 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 TBCKQ8TEA7 893 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 SMPDL3BQ92485 455 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 SHC3Q92529 594 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 POP5Q969H6 163 aaKnown RBP4.09□□□□□ -1.75
C2CD3-218ENST00000542484 CPNE4Q96A23 557 aaPredicted RBP4.09□□□□□ -1.75
C2CD3-218ENST00000542484 C19orf60Q96EN9 201 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 SDHCQ99643 169 aaPredicted RBP4.09□□□□□ -1.75
C2CD3-218ENST00000542484 P2RY13Q9BPV8 354 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 RBM4BQ9BQ04 359 aaKnown RBP4.09□□□□□ -1.75
C2CD3-218ENST00000542484 COPS4Q9BT78 406 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 TBCDQ9BTW9 1192 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 RBM4Q9BWF3 364 aaKnown RBP4.09□□□□□ -1.75
C2CD3-218ENST00000542484 PRRG3Q9BZD7 231 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 ZNF436Q9C0F3 470 aaPredicted RBP4.09□□□□□ -1.75
C2CD3-218ENST00000542484 ALX4Q9H161 411 aaPredicted RBP4.09□□□□□ -1.75
C2CD3-218ENST00000542484 DUSP21Q9H596 190 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 TFB2MQ9H5Q4 396 aaKnown RBP4.09□□□□□ -1.75
C2CD3-218ENST00000542484 FOLH1BQ9HBA9 442 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 POPDC2Q9HBU9 364 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 GKN1Q9NS71 199 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 FAM118AQ9NWS6 357 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 SDHAF2Q9NX18 166 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 IMPAD1Q9NX62 359 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 THUMPD1Q9NXG2 353 aaKnown RBP4.09□□□□□ -1.75
C2CD3-218ENST00000542484 TMOD3Q9NYL9 352 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 PAK5Q9P286 719 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 HACL1Q9UJ83 578 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 PROCRQ9UNN8 238 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 ERVW-1Q9UQF0 538 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 RUVBL2Q9Y230 463 aaKnown RBP4.09□□□□□ -1.75
C2CD3-218ENST00000542484 RNF6Q9Y252 685 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 ORC6Q9Y5N6 252 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 SLC22A7Q9Y694 548 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 ZNF541Q9H0D2 1346 aa4.09□□□□□ -1.75
C2CD3-218ENST00000542484 SCN7AQ01118 1682 aa4.09□□□□□ -1.76
C2CD3-218ENST00000542484 ADAMTS7Q9UKP4 1686 aa4.09□□□□□ -1.76
C2CD3-218ENST00000542484 ARAP2Q8WZ64 1704 aa4.09□□□□□ -1.76
C2CD3-218ENST00000542484 RBBP6Q7Z6E9 1792 aaKnown RBP4.09□□□□□ -1.76
C2CD3-218ENST00000542484 WASHC1A8K0Z3 465 aa4.08□□□□□ -1.76
C2CD3-218ENST00000542484 EFCAB7A8K855 629 aa4.08□□□□□ -1.76
C2CD3-218ENST00000542484 KRTAP29-1A8MX34 341 aaPredicted RBP4.08□□□□□ -1.76
C2CD3-218ENST00000542484 MAGEB17A8MXT2 336 aa4.08□□□□□ -1.76
C2CD3-218ENST00000542484 AIPO00170 330 aa4.08□□□□□ -1.76
C2CD3-218ENST00000542484 SLC28A1O00337 649 aa4.08□□□□□ -1.76
C2CD3-218ENST00000542484 SULT1C2O00338 296 aa4.08□□□□□ -1.76
C2CD3-218ENST00000542484 PHYHO14832 338 aa4.08□□□□□ -1.76
C2CD3-218ENST00000542484 ARPC2O15144 300 aa4.08□□□□□ -1.76
C2CD3-218ENST00000542484 CLIC2O15247 247 aa4.08□□□□□ -1.76
C2CD3-218ENST00000542484 SLC31A2O15432 143 aa4.08□□□□□ -1.76
C2CD3-218ENST00000542484 GRID2O43424 1007 aa4.08□□□□□ -1.76
C2CD3-218ENST00000542484 SYNGR3O43761 229 aa4.08□□□□□ -1.76
C2CD3-218ENST00000542484 HCN1O60741 890 aa4.08□□□□□ -1.76
C2CD3-218ENST00000542484 PIAS1O75925 651 aa4.08□□□□□ -1.76
C2CD3-218ENST00000542484 PGLSO95336 258 aa4.08□□□□□ -1.76
C2CD3-218ENST00000542484 ANGPTL1O95841 491 aa4.08□□□□□ -1.76
C2CD3-218ENST00000542484 LALBAP00709 142 aa4.08□□□□□ -1.76
C2CD3-218ENST00000542484 IGHV2-70P01814 119 aa4.08□□□□□ -1.76
C2CD3-218ENST00000542484 IGHV4-39P01824 125 aa4.08□□□□□ -1.76
C2CD3-218ENST00000542484 MT-ND2P03891 347 aa4.08□□□□□ -1.76
C2CD3-218ENST00000542484 OR56A5P0C7T3 313 aa4.08□□□□□ -1.76
C2CD3-218ENST00000542484 ZNF806P0C7X5 589 aa4.08□□□□□ -1.76
C2CD3-218ENST00000542484 TNNI1P19237 187 aa4.08□□□□□ -1.76
C2CD3-218ENST00000542484 PTBP1P26599 531 aaKnown RBP eCLIP4.08□□□□□ -1.76
C2CD3-218ENST00000542484 CA5AP35218 305 aa4.08□□□□□ -1.76
C2CD3-218ENST00000542484 SPRP35270 261 aaPredicted RBP4.08□□□□□ -1.76
C2CD3-218ENST00000542484 ATP5C1P36542 298 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms