RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 WBP2NLQ6ICG8 309 aa16.95■□□□□ 0.3
VPS33A-205ENST00000541169 C3orf33Q6P1S2 294 aa16.95■□□□□ 0.3
VPS33A-205ENST00000541169 RANBP3LQ86VV4 465 aaPredicted RBP16.95■□□□□ 0.3
VPS33A-205ENST00000541169 LACC1Q8IV20 430 aa16.95■□□□□ 0.3
VPS33A-205ENST00000541169 CLIP4Q8N3C7 705 aa16.95■□□□□ 0.3
VPS33A-205ENST00000541169 OR5M9Q8NGP3 310 aa16.95■□□□□ 0.3
VPS33A-205ENST00000541169 FBXO27Q8NI29 283 aa16.95■□□□□ 0.3
VPS33A-205ENST00000541169 ZFP3Q96NJ6 502 aa16.95■□□□□ 0.3
VPS33A-205ENST00000541169 PIF1Q9H611 641 aa16.95■□□□□ 0.3
VPS33A-205ENST00000541169 RLIMQ9NVW2 624 aa16.95■□□□□ 0.3
VPS33A-205ENST00000541169 TESQ9UGI8 421 aaKnown RBP16.95■□□□□ 0.3
VPS33A-205ENST00000541169 SLC9A8Q9Y2E8 581 aa16.95■□□□□ 0.3
VPS33A-205ENST00000541169 UBR5O95071 2799 aaPredicted RBP16.94■□□□□ 0.3
VPS33A-205ENST00000541169 PCNX3Q9H6A9 2034 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 CLEC18AA5D8T8 446 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 CD8B2A6NJW9 211 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 CCT8L1PA6NM43 557 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 ADAMDEC1O15204 470 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 FMO6PO60774 539 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 AGFG2O95081 481 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 HSD17B1P14061 328 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 HTR1EP28566 365 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 ACAA2P42765 397 aaKnown RBP16.94■□□□□ 0.3
VPS33A-205ENST00000541169 CPA2P48052 419 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 KCNJ5P48544 419 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 POLR2HP52434 150 aaKnown RBP16.94■□□□□ 0.3
VPS33A-205ENST00000541169 NCALDP61601 193 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 MERTKQ12866 999 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 FOXF1Q12946 379 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 NSUN5P2Q63ZY6 315 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 CLEC18BQ6UXF7 455 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 HMGN2P46Q86SG4 172 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 LILRA2Q8N149 483 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 LSMEM1Q8N8F7 131 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 CLEC18CQ8NCF0 446 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 PROX1Q92786 737 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 POP5Q969H6 163 aaKnown RBP16.94■□□□□ 0.3
VPS33A-205ENST00000541169 DMRTA2Q96SC8 542 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 ZNF559Q9BR84 538 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 TRIM2Q9C040 744 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 ADPRHL2Q9NX46 363 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 ALKBH4Q9NXW9 302 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 HEATR5AQ86XA9 2040 aa16.94■□□□□ 0.3
VPS33A-205ENST00000541169 ZNF208O43345 1280 aa16.93■□□□□ 0.3
VPS33A-205ENST00000541169 GCM2O75603 506 aaPredicted RBP16.93■□□□□ 0.3
VPS33A-205ENST00000541169 LGI1O95970 557 aa16.93■□□□□ 0.3
VPS33A-205ENST00000541169 FCGR2AP12318 317 aa16.93■□□□□ 0.3
VPS33A-205ENST00000541169 TIMP3P35625 211 aa16.93■□□□□ 0.3
VPS33A-205ENST00000541169 GSK3BP49841 420 aa16.93■□□□□ 0.3
VPS33A-205ENST00000541169 RASSF2P50749 326 aa16.93■□□□□ 0.3
VPS33A-205ENST00000541169 RNF144AP50876 292 aaPredicted RBP16.93■□□□□ 0.3
VPS33A-205ENST00000541169 RGS8P57771 180 aaPredicted RBP16.93■□□□□ 0.3
VPS33A-205ENST00000541169 PLAURQ03405 335 aa16.93■□□□□ 0.3
VPS33A-205ENST00000541169 DMTNQ08495 405 aa16.93■□□□□ 0.3
VPS33A-205ENST00000541169 TOMM34Q15785 309 aaPredicted RBP16.93■□□□□ 0.3
VPS33A-205ENST00000541169 ACSF3Q4G176 576 aaPredicted RBP16.93■□□□□ 0.3
VPS33A-205ENST00000541169 PLEKHM3Q6ZWE6 761 aa16.93■□□□□ 0.3
VPS33A-205ENST00000541169 FJX1Q86VR8 437 aa16.93■□□□□ 0.3
VPS33A-205ENST00000541169 POC1BQ8TC44 478 aa16.93■□□□□ 0.3
VPS33A-205ENST00000541169 DNAJA4Q8WW22 397 aaPredicted RBP16.93■□□□□ 0.3
VPS33A-205ENST00000541169 RND1Q92730 232 aa16.93■□□□□ 0.3
VPS33A-205ENST00000541169 TM9SF2Q99805 663 aa16.93■□□□□ 0.3
VPS33A-205ENST00000541169 TTYH2Q9BSA4 534 aa16.93■□□□□ 0.3
VPS33A-205ENST00000541169 C12orf10Q9HB07 376 aa16.93■□□□□ 0.3
VPS33A-205ENST00000541169 RPS6KB2Q9UBS0 482 aa16.93■□□□□ 0.3
VPS33A-205ENST00000541169 CHRNA9Q9UGM1 479 aa16.93■□□□□ 0.3
VPS33A-205ENST00000541169 ZNF175Q9Y473 711 aa16.93■□□□□ 0.3
VPS33A-205ENST00000541169 MYO18BQ8IUG5 2567 aa16.93■□□□□ 0.3
VPS33A-205ENST00000541169 BCAS1O75363 584 aaPredicted RBP16.92■□□□□ 0.3
VPS33A-205ENST00000541169 ATP5HO75947 161 aa16.92■□□□□ 0.3
VPS33A-205ENST00000541169 STARP49675 285 aa16.92■□□□□ 0.3
VPS33A-205ENST00000541169 SRYQ05066 204 aa16.92■□□□□ 0.3
VPS33A-205ENST00000541169 DCST1Q5T197 706 aa16.92■□□□□ 0.3
VPS33A-205ENST00000541169 SWT1Q5T5J6 900 aaKnown RBP16.92■□□□□ 0.3
VPS33A-205ENST00000541169 XKRXQ6PP77 449 aa16.92■□□□□ 0.3
VPS33A-205ENST00000541169 ADGRE4PQ86SQ3 457 aa16.92■□□□□ 0.3
VPS33A-205ENST00000541169 DEFB107AQ8IZN7 70 aa16.92■□□□□ 0.3
VPS33A-205ENST00000541169 WNT2BQ93097 391 aa16.92■□□□□ 0.3
VPS33A-205ENST00000541169 TAMM41Q96BW9 452 aa16.92■□□□□ 0.3
VPS33A-205ENST00000541169 KLHL15Q96M94 604 aa16.92■□□□□ 0.3
VPS33A-205ENST00000541169 CDRT15Q96T59 188 aa16.92■□□□□ 0.3
VPS33A-205ENST00000541169 POLR2J2Q9GZM3 115 aaKnown RBP16.92■□□□□ 0.3
VPS33A-205ENST00000541169 ADAM19Q9H013 955 aa16.92■□□□□ 0.3
VPS33A-205ENST00000541169 POLR2J3Q9H1A7 115 aaKnown RBP16.92■□□□□ 0.3
VPS33A-205ENST00000541169 COQ3Q9NZJ6 369 aa16.92■□□□□ 0.3
VPS33A-205ENST00000541169 SELENONQ9NZV5 590 aa16.92■□□□□ 0.3
VPS33A-205ENST00000541169 TNFRSF10DQ9UBN6 386 aa16.92■□□□□ 0.3
VPS33A-205ENST00000541169 SH3BGRL2Q9UJC5 107 aa16.92■□□□□ 0.3
VPS33A-205ENST00000541169 ERRFI1Q9UJM3 462 aaPredicted RBP16.92■□□□□ 0.3
VPS33A-205ENST00000541169 RPS6KA6Q9UK32 745 aa16.92■□□□□ 0.3
VPS33A-205ENST00000541169 PRPF19Q9UMS4 504 aaKnown RBP16.92■□□□□ 0.3
VPS33A-205ENST00000541169 CHST2Q9Y4C5 530 aa16.92■□□□□ 0.3
VPS33A-205ENST00000541169 WIPF3A6NGB9 483 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 HSPB2A8KAH6 182 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 CXCR6O00574 342 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 IL2RAP01589 272 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 FESP07332 822 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 PNMTP11086 282 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 TCEA1P23193 301 aaKnown RBP16.91■□□□□ 0.3
VPS33A-205ENST00000541169 SLC7A1P30825 629 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms