RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 ASMTP46597 345 aa23.62■■□□□ 1.37
CHFR-218ENST00000540963 ATP12AP54707 1039 aa23.62■■□□□ 1.37
CHFR-218ENST00000540963 PDK3Q15120 406 aa23.62■■□□□ 1.37
CHFR-218ENST00000540963 CFAP157Q5JU67 520 aa23.62■■□□□ 1.37
CHFR-218ENST00000540963 R3HCC1LQ7Z5L2 792 aaKnown RBP23.62■■□□□ 1.37
CHFR-218ENST00000540963 ZNF525Q8N782 197 aa23.62■■□□□ 1.37
CHFR-218ENST00000540963 TOR1AIP2Q8NFQ8 470 aa23.62■■□□□ 1.37
CHFR-218ENST00000540963 C10orf105Q8TEF2 133 aa23.62■■□□□ 1.37
CHFR-218ENST00000540963 OTUB1Q96FW1 271 aaPredicted RBP23.62■■□□□ 1.37
CHFR-218ENST00000540963 TSSK3Q96PN8 268 aa23.62■■□□□ 1.37
CHFR-218ENST00000540963 ZNF300Q96RE9 604 aaPredicted RBP23.62■■□□□ 1.37
CHFR-218ENST00000540963 SIRT3Q9NTG7 399 aaPredicted RBP23.62■■□□□ 1.37
CHFR-218ENST00000540963 EMC3Q9P0I2 261 aa23.62■■□□□ 1.37
CHFR-218ENST00000540963 DTNAQ9Y4J8 743 aa23.62■■□□□ 1.37
CHFR-218ENST00000540963 NPIPB9F8W1W9 429 aa23.61■■□□□ 1.37
CHFR-218ENST00000540963 LMX1BO60663 402 aa23.61■■□□□ 1.37
CHFR-218ENST00000540963 KRT16P08779 473 aa23.61■■□□□ 1.37
CHFR-218ENST00000540963 IGHV4-31P0DP07 118 aa23.61■■□□□ 1.37
CHFR-218ENST00000540963 CD40P25942 277 aa23.61■■□□□ 1.37
CHFR-218ENST00000540963 LASP1Q14847 261 aaKnown RBP23.61■■□□□ 1.37
CHFR-218ENST00000540963 DDX59Q5T1V6 619 aaKnown RBP eCLIP23.61■■□□□ 1.371e-6■■■■■ 38.4
CHFR-218ENST00000540963 FBXW9Q5XUX1 488 aa23.61■■□□□ 1.37
CHFR-218ENST00000540963 ACTRT3Q9BYD9 372 aa23.61■■□□□ 1.37
CHFR-218ENST00000540963 SLC25A15Q9Y619 301 aa23.61■■□□□ 1.37
CHFR-218ENST00000540963 IGKV3D-15A0A087WSY6 115 aa23.6■■□□□ 1.37
CHFR-218ENST00000540963 ZNF264O43296 627 aa23.6■■□□□ 1.37
CHFR-218ENST00000540963 PROCP04070 461 aa23.6■■□□□ 1.37
CHFR-218ENST00000540963 USF1P22415 310 aaPredicted RBP23.6■■□□□ 1.37
CHFR-218ENST00000540963 EDNRAP25101 427 aa23.6■■□□□ 1.37
CHFR-218ENST00000540963 GZMKP49863 264 aa23.6■■□□□ 1.37
CHFR-218ENST00000540963 EFNA4P52798 201 aa23.6■■□□□ 1.37
CHFR-218ENST00000540963 CBFBQ13951 182 aa23.6■■□□□ 1.37
CHFR-218ENST00000540963 DCST2Q5T1A1 773 aa23.6■■□□□ 1.37
CHFR-218ENST00000540963 C1QTNF12Q5T7M4 302 aa23.6■■□□□ 1.37
CHFR-218ENST00000540963 CHMP6Q96FZ7 201 aa23.6■■□□□ 1.37
CHFR-218ENST00000540963 DNAJA2O60884 412 aa23.59■■□□□ 1.37
CHFR-218ENST00000540963 GLRA3O75311 464 aa23.59■■□□□ 1.37
CHFR-218ENST00000540963 SRD5A1P18405 259 aa23.59■■□□□ 1.37
CHFR-218ENST00000540963 FABP6P51161 128 aa23.59■■□□□ 1.37
CHFR-218ENST00000540963 CSNK2A1P68400 391 aaPredicted RBP23.59■■□□□ 1.37
CHFR-218ENST00000540963 LSM11P83369 360 aaKnown RBP eCLIP23.59■■□□□ 1.37
CHFR-218ENST00000540963 QPRTQ15274 297 aa23.59■■□□□ 1.37
CHFR-218ENST00000540963 PSMA8Q8TAA3 256 aa23.59■■□□□ 1.37
CHFR-218ENST00000540963 ADAMTS15Q8TE58 950 aa23.59■■□□□ 1.37
CHFR-218ENST00000540963 OR5B2Q96R09 309 aa23.59■■□□□ 1.37
CHFR-218ENST00000540963 INPP5KQ9BT40 448 aa23.59■■□□□ 1.37
CHFR-218ENST00000540963 MANSC1Q9H8J5 431 aa23.59■■□□□ 1.37
CHFR-218ENST00000540963 NUP214P35658 2090 aaPredicted RBP23.58■■□□□ 1.37
CHFR-218ENST00000540963 ESPNB1AK53 854 aa23.58■■□□□ 1.37
CHFR-218ENST00000540963 HAX1O00165 279 aa23.58■■□□□ 1.37
CHFR-218ENST00000540963 RPL3P39023 403 aaKnown RBP23.58■■□□□ 1.37
CHFR-218ENST00000540963 CHRNB3Q05901 458 aa23.58■■□□□ 1.37
CHFR-218ENST00000540963 CCDC153Q494R4 210 aa23.58■■□□□ 1.37
CHFR-218ENST00000540963 RFTN2Q52LD8 501 aaPredicted RBP23.58■■□□□ 1.37
CHFR-218ENST00000540963 ABLIM2Q6H8Q1 611 aa23.58■■□□□ 1.37
CHFR-218ENST00000540963 OR7E24Q6IFN5 339 aa23.58■■□□□ 1.37
CHFR-218ENST00000540963 TMPPEQ6ZT21 453 aa23.58■■□□□ 1.37
CHFR-218ENST00000540963 OR56A1Q8NGH5 318 aa23.58■■□□□ 1.37
CHFR-218ENST00000540963 ST8SIA1Q92185 356 aa23.58■■□□□ 1.37
CHFR-218ENST00000540963 ZNF524Q96C55 264 aa23.58■■□□□ 1.37
CHFR-218ENST00000540963 ANKZF1Q9H8Y5 726 aa23.58■■□□□ 1.37
CHFR-218ENST00000540963 SERINC1Q9NRX5 453 aa23.58■■□□□ 1.37
CHFR-218ENST00000540963 TAS2R16Q9NYV7 291 aa23.58■■□□□ 1.37
CHFR-218ENST00000540963 BAIAP2L1Q9UHR4 511 aa23.58■■□□□ 1.37
CHFR-218ENST00000540963 ATP6V1HQ9UI12 483 aa23.58■■□□□ 1.37
CHFR-218ENST00000540963 FAF1Q9UNN5 650 aaPredicted RBP23.58■■□□□ 1.37
CHFR-218ENST00000540963 NPIPA5A0A0B4J1W7 369 aa23.57■■□□□ 1.36
CHFR-218ENST00000540963 CIB4A0PJX0 185 aa23.57■■□□□ 1.36
CHFR-218ENST00000540963 C9JVG2 144 aa23.57■■□□□ 1.36
CHFR-218ENST00000540963 NPIPA7E9PJI5 369 aa23.57■■□□□ 1.36
CHFR-218ENST00000540963 PLIN3O60664 434 aa23.57■■□□□ 1.36
CHFR-218ENST00000540963 RAD51DO75771 328 aa23.57■■□□□ 1.36
CHFR-218ENST00000540963 H6PDO95479 791 aa23.57■■□□□ 1.36
CHFR-218ENST00000540963 NPIPA8P0DM63 369 aa23.57■■□□□ 1.36
CHFR-218ENST00000540963 UBL4AP11441 157 aa23.57■■□□□ 1.36
CHFR-218ENST00000540963 ZNF16P17020 682 aaPredicted RBP23.57■■□□□ 1.36
CHFR-218ENST00000540963 DIO1P49895 249 aa23.57■■□□□ 1.36
CHFR-218ENST00000540963 TIGD2Q4W5G0 525 aa23.57■■□□□ 1.36
CHFR-218ENST00000540963 CLEC6AQ6EIG7 209 aa23.57■■□□□ 1.36
CHFR-218ENST00000540963 NATD1Q8N6N6 113 aa23.57■■□□□ 1.36
CHFR-218ENST00000540963 EIF1ADQ8N9N8 165 aaKnown RBP23.57■■□□□ 1.36
CHFR-218ENST00000540963 OR2T11Q8NH01 316 aa23.57■■□□□ 1.36
CHFR-218ENST00000540963 OR52N5Q8NH56 324 aa23.57■■□□□ 1.36
CHFR-218ENST00000540963 SLC25A43Q8WUT9 341 aaPredicted RBP23.57■■□□□ 1.36
CHFR-218ENST00000540963 ZNF775Q96BV0 537 aaPredicted RBP23.57■■□□□ 1.36
CHFR-218ENST00000540963 MUS81Q96NY9 551 aa23.57■■□□□ 1.36
CHFR-218ENST00000540963 ASB6Q9NWX5 421 aa23.57■■□□□ 1.36
CHFR-218ENST00000540963 KCNS2Q9ULS6 477 aa23.57■■□□□ 1.36
CHFR-218ENST00000540963 PTGDR2Q9Y5Y4 395 aa23.57■■□□□ 1.36
CHFR-218ENST00000540963 PMF1-BGLAPU3KQ54 211 aa23.57■■□□□ 1.36
CHFR-218ENST00000540963 LSM1O15116 133 aaKnown RBP23.56■■□□□ 1.36
CHFR-218ENST00000540963 CCT3P49368 545 aaKnown RBP23.56■■□□□ 1.36
CHFR-218ENST00000540963 ZNF83P51522 516 aa23.56■■□□□ 1.36
CHFR-218ENST00000540963 RPL38P63173 70 aaKnown RBP23.56■■□□□ 1.36
CHFR-218ENST00000540963 NDUFAF6Q330K2 333 aa23.56■■□□□ 1.36
CHFR-218ENST00000540963 FAM166AQ6J272 317 aa23.56■■□□□ 1.36
CHFR-218ENST00000540963 B3GLCTQ6Y288 498 aa23.56■■□□□ 1.36
CHFR-218ENST00000540963 MTDHQ86UE4 582 aaKnown RBP23.56■■□□□ 1.36
CHFR-218ENST00000540963 UBE2J2Q8N2K1 259 aa23.56■■□□□ 1.36
CHFR-218ENST00000540963 TMCO5AQ8N6Q1 288 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms