RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 BMP8AQ7Z5Y6 402 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 OR2L13Q8N349 312 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 OR4C6Q8NH72 309 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 MOAP1Q96BY2 351 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 ERMAPQ96PL5 475 aaPredicted RBP12.63□□□□□ -0.39
BNIP3-202ENST00000540159 FAM60AQ9NP50 221 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 RBFOX1Q9NWB1 397 aaKnown RBP12.63□□□□□ -0.39
BNIP3-202ENST00000540159 A0A1W2PQF6 199 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 SLC9B1P1A6NJY1 282 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 CHST10O43529 356 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 NDUFB5O43674 189 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 PTHLHP12272 177 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 FGF9P31371 208 aaPredicted RBP12.63□□□□□ -0.39
BNIP3-202ENST00000540159 RPS27P42677 84 aaKnown RBP12.63□□□□□ -0.39
BNIP3-202ENST00000540159 CLDN12P56749 244 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 HYAL4Q2M3T9 481 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 BTBD16Q32M84 506 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 SERPINA12Q8IW75 414 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 ZNF619Q8N2I2 560 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 ZNRF4Q8WWF5 429 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 LMF1Q96S06 567 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 ABHD1Q96SE0 405 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 NKX3-1Q99801 234 aaPredicted RBP12.63□□□□□ -0.39
BNIP3-202ENST00000540159 NUDT15Q9NV35 164 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 LYARQ9NX58 379 aaKnown RBP12.63□□□□□ -0.39
BNIP3-202ENST00000540159 GDE1Q9NZC3 331 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 ZMIZ1Q9ULJ6 1067 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 AK6Q9Y3D8 172 aaKnown RBP12.63□□□□□ -0.39
BNIP3-202ENST00000540159 SLCO1B1Q9Y6L6 691 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 INMT-MINDY4F8WBC2 141 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 BHLHE40O14503 412 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 KLF4O43474 513 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 RGS9O75916 674 aaPredicted RBP12.63□□□□□ -0.39
BNIP3-202ENST00000540159 ARSBP15848 533 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 S100A1P23297 94 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 ARHGAP11BQ3KRB8 267 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 C1QTNF12Q5T7M4 302 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 SDE2Q6IQ49 451 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 HEPHL1Q6MZM0 1159 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 CD200R1LQ6Q8B3 271 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 NUDT18Q6ZVK8 323 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 TRMT10AQ8TBZ6 339 aaKnown RBP12.63□□□□□ -0.39
BNIP3-202ENST00000540159 SMPDL3BQ92485 455 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 GHSRQ92847 366 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 KISS1RQ969F8 398 aaPredicted RBP12.63□□□□□ -0.39
BNIP3-202ENST00000540159 TMEM43Q9BTV4 400 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 SLC25A18Q9H1K4 315 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 MRPS18AQ9NVS2 196 aaKnown RBP12.63□□□□□ -0.39
BNIP3-202ENST00000540159 FLRT3Q9NZU0 649 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 MED31Q9Y3C7 131 aa12.63□□□□□ -0.39
BNIP3-202ENST00000540159 A0A0A6YYC8 382 aaPredicted RBP12.62□□□□□ -0.39
BNIP3-202ENST00000540159 I3L1I5 382 aaPredicted RBP12.62□□□□□ -0.39
BNIP3-202ENST00000540159 HMGN1P05114 100 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 DRD5P21918 477 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 NDUFS1P28331 727 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 RPL4P36578 427 aaKnown RBP12.62□□□□□ -0.39
BNIP3-202ENST00000540159 CCR6P51684 374 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 GPR176Q14439 515 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 DUSP6Q16828 381 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 MRGPREQ86SM8 312 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 CDK20Q8IZL9 346 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 SLC44A3Q8N4M1 653 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 ZPLD1Q8TCW7 415 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 RSC1A1Q92681 617 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 TSSK2Q96PF2 358 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 ZNF222Q9UK12 451 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 SLC22A7Q9Y694 548 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 MED12Q93074 2177 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 A0A1B0GWA3 101 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 FAM86C2PA6NEL3 165 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 IGHA1P01876 353 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 YES1P07947 543 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 NID1P14543 1247 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 TALDO1P37837 337 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 HTR2BP41595 481 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 ALG10BQ5I7T1 473 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 RNLSQ5VYX0 342 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 FAM205BPQ63HN1 556 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 MZT2BQ6NZ67 158 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 SFXN4Q6P4A7 337 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.62□□□□□ -0.39
BNIP3-202ENST00000540159 ZNF433Q8N7K0 673 aaPredicted RBP12.62□□□□□ -0.39
BNIP3-202ENST00000540159 ZNF764Q96H86 408 aaPredicted RBP12.62□□□□□ -0.39
BNIP3-202ENST00000540159 RNF170Q96K19 258 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 SPACA7Q96KW9 195 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 ZFYVE21Q9BQ24 234 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 THAP7Q9BT49 309 aaPredicted RBP12.62□□□□□ -0.39
BNIP3-202ENST00000540159 NDC1Q9BTX1 674 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 TRIM36Q9NQ86 728 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 SIGLEC7Q9Y286 467 aa12.62□□□□□ -0.39
BNIP3-202ENST00000540159 FAM172BPA6NC97 362 aa12.61□□□□□ -0.39
BNIP3-202ENST00000540159 RIIAD1A6NNX1 92 aa12.61□□□□□ -0.39
BNIP3-202ENST00000540159 C17orf51A8MQB3 221 aa12.61□□□□□ -0.39
BNIP3-202ENST00000540159 GPLD1P80108 840 aa12.61□□□□□ -0.39
BNIP3-202ENST00000540159 ADAM15Q13444 863 aa12.61□□□□□ -0.39
BNIP3-202ENST00000540159 MZT2AQ6P582 158 aa12.61□□□□□ -0.39
BNIP3-202ENST00000540159 FAM181AQ8N9Y4 354 aa12.61□□□□□ -0.39
BNIP3-202ENST00000540159 AVL9Q8NBF6 648 aa12.61□□□□□ -0.39
BNIP3-202ENST00000540159 WDR92Q96MX6 357 aa12.61□□□□□ -0.39
BNIP3-202ENST00000540159 SERINC2Q96SA4 455 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms