RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 ITPKCQ96DU7 683 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 EPHX3Q9H6B9 360 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 HS3ST2Q9Y278 367 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 MITFO75030 526 aaPredicted RBP6.07□□□□□ -1.44
LSAMP-207ENST00000539563 IFNA10P01566 189 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 FXYD4P59646 89 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 ZNF616Q08AN1 781 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 SFRP4Q6FHJ7 346 aaPredicted RBP6.07□□□□□ -1.44
LSAMP-207ENST00000539563 ADAMTSL4Q6UY14 1074 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 SLC43A2Q8N370 569 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 FAM160A2Q8N612 972 aaPredicted RBP6.07□□□□□ -1.44
LSAMP-207ENST00000539563 ADAMTS14Q8WXS8 1223 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 RSC1A1Q92681 617 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 MUL1Q969V5 352 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 SLC39A13Q96H72 371 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 SGCZQ96LD1 299 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 DPCDQ9BVM2 203 aaPredicted RBP6.07□□□□□ -1.44
LSAMP-207ENST00000539563 SYNPO2LQ9H987 977 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 CUEDC1Q9NWM3 386 aaPredicted RBP6.07□□□□□ -1.44
LSAMP-207ENST00000539563 NLKQ9UBE8 527 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 SLC22A5O76082 557 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 TFP02787 698 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 CPMP14384 443 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 MMP12P39900 470 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 XCR1P46094 333 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 RAB5BP61020 215 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 ACTBL2Q562R1 376 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 OR56B2PQ8NGI1 322 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 ZFAND1Q8TCF1 268 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 RTP3Q9BQQ7 232 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 ATPIF1Q9UII2 106 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 HHLA2Q9UM44 414 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 ANKRD33BA6NCL7 494 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 C2orf72A6NCS6 295 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 EEF1E1-BLOC1S5C9J1V9 151 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 CTHP32929 405 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 RPE65Q16518 533 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 PGGHGQ32M88 737 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 UBE2UQ5VVX9 321 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 NCCRP1Q6ZVX7 275 aaPredicted RBP6.07□□□□□ -1.44
LSAMP-207ENST00000539563 SPARTQ8N0X7 666 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 SLC15A4Q8N697 577 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 ARFGAP1Q8N6T3 406 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 NDNFQ8TB73 568 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 CNTNAP3BQ96NU0 1288 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 ZNF334Q9HCZ1 680 aaPredicted RBP6.07□□□□□ -1.44
LSAMP-207ENST00000539563 NGBQ9NPG2 151 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 MOKQ9UQ07 419 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 VDAC3Q9Y277 283 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 PRSS21Q9Y6M0 314 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 SCN7AQ01118 1682 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 PLSCR5A0PG75 271 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 H3BMQ9 156 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 SEC14L2O76054 403 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 CX3CR1P49238 355 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 C17orf67Q0P5P2 114 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 METAP1DQ6UB28 335 aaPredicted RBP6.07□□□□□ -1.44
LSAMP-207ENST00000539563 MKXQ8IYA7 352 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 C3orf58Q8NDZ4 430 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 OR9K2Q8NGE7 335 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 OR51Q1Q8NH59 317 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 NT5C3BQ969T7 300 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 COG8Q96MW5 612 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 ADOQ96SZ5 270 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 DNAJB11Q9UBS4 358 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 PRELID1Q9Y255 219 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 ADAM23O75077 832 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 ATXN1LP0C7T5 689 aaKnown RBP6.07□□□□□ -1.44
LSAMP-207ENST00000539563 ARAFP10398 606 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 OPRL1P41146 370 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 FAM189BP81408 668 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 GPR157Q5UAW9 335 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 PLCXD3Q63HM9 321 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 TFAP2CQ92754 450 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 UHRF1Q96T88 793 aaPredicted RBP6.07□□□□□ -1.44
LSAMP-207ENST00000539563 DDX31Q9H8H2 851 aaKnown RBP6.07□□□□□ -1.44
LSAMP-207ENST00000539563 STARD5Q9NSY2 213 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 EMCNQ9ULC0 261 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 BCORQ6W2J9 1755 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 OR5K3A6NET4 321 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 FAM171A2A8MVW0 826 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 ZNF264O43296 627 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 GABRA5P31644 462 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 CA5AP35218 305 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 CAV3P56539 151 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 ERVK-25P63136 954 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 HBA1P69905 142 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 TSPAN31Q12999 210 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 LRRC56Q8IYG6 542 aaPredicted RBP6.07□□□□□ -1.44
LSAMP-207ENST00000539563 NLGN4YQ8NFZ3 816 aaPredicted RBP6.07□□□□□ -1.44
LSAMP-207ENST00000539563 BRIX1Q8TDN6 353 aaKnown RBP6.07□□□□□ -1.44
LSAMP-207ENST00000539563 GTF2H4Q92759 462 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 MICU1Q9BPX6 476 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 THAP7Q9BT49 309 aaPredicted RBP6.07□□□□□ -1.44
LSAMP-207ENST00000539563 SLC25A31Q9H0C2 315 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 TEX10Q9NXF1 929 aaPredicted RBP6.07□□□□□ -1.44
LSAMP-207ENST00000539563 B3GNT2Q9NY97 397 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 IL37Q9NZH6 218 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 ZNF281Q9Y2X9 895 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 KIF13BQ9NQT8 1826 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms