RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 C8orf82Q6P1X6 216 aaPredicted RBP14.17□□□□□ -0.14
RPAIN-206ENST00000539417 MTFR2Q6P444 385 aa14.17□□□□□ -0.14
RPAIN-206ENST00000539417 SERPINA11Q86U17 422 aa14.17□□□□□ -0.14
RPAIN-206ENST00000539417 CMIPQ8IY22 773 aa14.17□□□□□ -0.14
RPAIN-206ENST00000539417 LILRA2Q8N149 483 aa14.17□□□□□ -0.14
RPAIN-206ENST00000539417 FIG4Q92562 907 aa14.17□□□□□ -0.14
RPAIN-206ENST00000539417 ZNF583Q96ND8 569 aa14.17□□□□□ -0.14
RPAIN-206ENST00000539417 PRR14Q9BWN1 585 aa14.17□□□□□ -0.14
RPAIN-206ENST00000539417 HHATLQ9HCP6 504 aa14.17□□□□□ -0.14
RPAIN-206ENST00000539417 ACER3Q9NUN7 267 aa14.17□□□□□ -0.14
RPAIN-206ENST00000539417 ARL8BQ9NVJ2 186 aa14.17□□□□□ -0.14
RPAIN-206ENST00000539417 CD8B2A6NJW9 211 aa14.16□□□□□ -0.14
RPAIN-206ENST00000539417 C19orf84I3L1E1 186 aa14.16□□□□□ -0.14
RPAIN-206ENST00000539417 EIF1AYO14602 144 aaKnown RBP14.16□□□□□ -0.14
RPAIN-206ENST00000539417 TNFSF11O14788 317 aa14.16□□□□□ -0.14
RPAIN-206ENST00000539417 OPN1SWP03999 348 aa14.16□□□□□ -0.14
RPAIN-206ENST00000539417 HOXD4P09016 255 aaPredicted RBP14.16□□□□□ -0.14
RPAIN-206ENST00000539417 ETS2P15036 469 aa14.16□□□□□ -0.14
RPAIN-206ENST00000539417 PGCP20142 388 aa14.16□□□□□ -0.14
RPAIN-206ENST00000539417 CEACAM8P31997 349 aaPredicted RBP14.16□□□□□ -0.14
RPAIN-206ENST00000539417 PTGER4P35408 488 aa14.16□□□□□ -0.14
RPAIN-206ENST00000539417 SLC6A8P48029 635 aa14.16□□□□□ -0.14
RPAIN-206ENST00000539417 ZNF136P52737 540 aa14.16□□□□□ -0.14
RPAIN-206ENST00000539417 RAC1P63000 192 aa14.16□□□□□ -0.14
RPAIN-206ENST00000539417 EPS8Q12929 822 aa14.16□□□□□ -0.14
RPAIN-206ENST00000539417 FOXF2Q12947 444 aa14.16□□□□□ -0.14
RPAIN-206ENST00000539417 GNA13Q14344 377 aa14.16□□□□□ -0.14
RPAIN-206ENST00000539417 RNF220Q5VTB9 566 aa14.16□□□□□ -0.14
RPAIN-206ENST00000539417 PLEKHM3Q6ZWE6 761 aa14.16□□□□□ -0.14
RPAIN-206ENST00000539417 PCYOX1LQ8NBM8 494 aa14.16□□□□□ -0.14
RPAIN-206ENST00000539417 HIPK4Q8NE63 616 aa14.16□□□□□ -0.14
RPAIN-206ENST00000539417 OR8J3Q8NGG0 315 aa14.16□□□□□ -0.14
RPAIN-206ENST00000539417 DNAJA3Q96EY1 480 aa14.16□□□□□ -0.14
RPAIN-206ENST00000539417 MRGPRX4Q96LA9 322 aa14.16□□□□□ -0.14
RPAIN-206ENST00000539417 SPATA9Q9BWV2 254 aa14.16□□□□□ -0.14
RPAIN-206ENST00000539417 PINK1Q9BXM7 581 aa14.16□□□□□ -0.14
RPAIN-206ENST00000539417 CALHM2Q9HA72 323 aa14.16□□□□□ -0.14
RPAIN-206ENST00000539417 CTPS2Q9NRF8 586 aa14.16□□□□□ -0.14
RPAIN-206ENST00000539417 DOCK7Q96N67 2140 aa14.15□□□□□ -0.14
RPAIN-206ENST00000539417 NKX2-6A6NCS4 301 aa14.15□□□□□ -0.14
RPAIN-206ENST00000539417 MBD3L4A6NDZ8 208 aaPredicted RBP14.15□□□□□ -0.14
RPAIN-206ENST00000539417 MBD3L3A6NE82 208 aaPredicted RBP14.15□□□□□ -0.14
RPAIN-206ENST00000539417 MBD3L5A6NJ08 208 aaPredicted RBP14.15□□□□□ -0.14
RPAIN-206ENST00000539417 LINC01387J3KSC0 135 aa14.15□□□□□ -0.14
RPAIN-206ENST00000539417 FAM107AO95990 144 aa14.15□□□□□ -0.14
RPAIN-206ENST00000539417 NPPAP01160 153 aa14.15□□□□□ -0.14
RPAIN-206ENST00000539417 KLK2P20151 261 aa14.15□□□□□ -0.14
RPAIN-206ENST00000539417 EIF1P41567 113 aaKnown RBP14.15□□□□□ -0.14
RPAIN-206ENST00000539417 SMSP52788 366 aa14.15□□□□□ -0.14
RPAIN-206ENST00000539417 DLX5P56178 289 aa14.15□□□□□ -0.14
RPAIN-206ENST00000539417 MERTKQ12866 999 aa14.15□□□□□ -0.14
RPAIN-206ENST00000539417 LARS2Q15031 903 aaKnown RBP14.15□□□□□ -0.14
RPAIN-206ENST00000539417 VMACQ2NL98 169 aa14.15□□□□□ -0.14
RPAIN-206ENST00000539417 RIPPLY2Q5TAB7 128 aa14.15□□□□□ -0.14
RPAIN-206ENST00000539417 GRAMD2AQ8IUY3 354 aa14.15□□□□□ -0.14
RPAIN-206ENST00000539417 LACC1Q8IV20 430 aa14.15□□□□□ -0.14
RPAIN-206ENST00000539417 SLC15A3Q8IY34 581 aa14.15□□□□□ -0.14
RPAIN-206ENST00000539417 EID3Q8N140 333 aa14.15□□□□□ -0.14
RPAIN-206ENST00000539417 MEIOBQ8N635 442 aa14.15□□□□□ -0.14
RPAIN-206ENST00000539417 METTL25Q8N6Q8 603 aa14.15□□□□□ -0.14
RPAIN-206ENST00000539417 SMYD1Q8NB12 490 aa14.15□□□□□ -0.14
RPAIN-206ENST00000539417 C11orf65Q8NCR3 313 aa14.15□□□□□ -0.14
RPAIN-206ENST00000539417 GPR32P1Q8NGA4 272 aa14.15□□□□□ -0.14
RPAIN-206ENST00000539417 MBD3L2Q8NHZ7 208 aaPredicted RBP14.15□□□□□ -0.14
RPAIN-206ENST00000539417 ZNF563Q8TA94 476 aa14.15□□□□□ -0.14
RPAIN-206ENST00000539417 ST8SIA1Q92185 356 aa14.15□□□□□ -0.14
RPAIN-206ENST00000539417 SRXN1Q9BYN0 137 aa14.15□□□□□ -0.14
RPAIN-206ENST00000539417 COQ10BQ9H8M1 238 aa14.15□□□□□ -0.14
RPAIN-206ENST00000539417 GID8Q9NWU2 228 aa14.15□□□□□ -0.14
RPAIN-206ENST00000539417 PLEKHB1Q9UF11 243 aaPredicted RBP14.15□□□□□ -0.14
RPAIN-206ENST00000539417 CRYBG3Q68DQ2 2970 aa14.14□□□□□ -0.15
RPAIN-206ENST00000539417 A0A1W2PNR3 127 aa14.14□□□□□ -0.15
RPAIN-206ENST00000539417 CFAP73A6NFT4 308 aa14.14□□□□□ -0.15
RPAIN-206ENST00000539417 FAM90A27PA6NNH2 459 aa14.14□□□□□ -0.15
RPAIN-206ENST00000539417 M0QX08 132 aa14.14□□□□□ -0.15
RPAIN-206ENST00000539417 NME4O00746 187 aa14.14□□□□□ -0.15
RPAIN-206ENST00000539417 ADAMDEC1O15204 470 aa14.14□□□□□ -0.15
RPAIN-206ENST00000539417 CXCL13O43927 109 aa14.14□□□□□ -0.15
RPAIN-206ENST00000539417 AQP8O94778 261 aa14.14□□□□□ -0.15
RPAIN-206ENST00000539417 MFN2O95140 757 aa14.14□□□□□ -0.15
RPAIN-206ENST00000539417 CCNA2P20248 432 aa14.14□□□□□ -0.15
RPAIN-206ENST00000539417 ADH6P28332 368 aa14.14□□□□□ -0.15
RPAIN-206ENST00000539417 PCGF2P35227 344 aa14.14□□□□□ -0.15
RPAIN-206ENST00000539417 TIMP3P35625 211 aa14.14□□□□□ -0.15
RPAIN-206ENST00000539417 EIF1AXP47813 144 aaKnown RBP14.14□□□□□ -0.15
RPAIN-206ENST00000539417 NUDT2P50583 147 aa14.14□□□□□ -0.15
RPAIN-206ENST00000539417 TMEM176BQ3YBM2 270 aaPredicted RBP14.14□□□□□ -0.15
RPAIN-206ENST00000539417 XKRXQ6PP77 449 aa14.14□□□□□ -0.15
RPAIN-206ENST00000539417 ADGRG3Q86Y34 549 aa14.14□□□□□ -0.15
RPAIN-206ENST00000539417 GCNT2Q8N0V5 402 aa14.14□□□□□ -0.15
RPAIN-206ENST00000539417 FITM2Q8N6M3 262 aa14.14□□□□□ -0.15
RPAIN-206ENST00000539417 RELL2Q8NC24 303 aaPredicted RBP14.14□□□□□ -0.15
RPAIN-206ENST00000539417 OR10D3Q8NH80 312 aa14.14□□□□□ -0.15
RPAIN-206ENST00000539417 FNDC9Q8TBE3 224 aa14.14□□□□□ -0.15
RPAIN-206ENST00000539417 UCN2Q96RP3 112 aa14.14□□□□□ -0.15
RPAIN-206ENST00000539417 ECSITQ9BQ95 431 aa14.14□□□□□ -0.15
RPAIN-206ENST00000539417 ZNF232Q9UNY5 417 aa14.14□□□□□ -0.15
RPAIN-206ENST00000539417 ANGPT4Q9Y264 503 aa14.14□□□□□ -0.15
RPAIN-206ENST00000539417 IFT52Q9Y366 437 aa14.14□□□□□ -0.15
RPAIN-206ENST00000539417 MED12LQ86YW9 2145 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms