RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 NXNQ6DKJ4 435 aa13.36□□□□□ -0.27
RAB40B-202ENST00000538809 EPGNQ6UW88 154 aa13.36□□□□□ -0.27
RAB40B-202ENST00000538809 FRRS1Q6ZNA5 592 aa13.36□□□□□ -0.27
RAB40B-202ENST00000538809 LSRQ86X29 649 aaPredicted RBP13.36□□□□□ -0.27
RAB40B-202ENST00000538809 TGIF2LYQ8IUE0 185 aa13.36□□□□□ -0.27
RAB40B-202ENST00000538809 RNF128Q8TEB7 428 aa13.36□□□□□ -0.27
RAB40B-202ENST00000538809 ZFP90Q8TF47 636 aa13.36□□□□□ -0.27
RAB40B-202ENST00000538809 OIT3Q8WWZ8 545 aa13.36□□□□□ -0.27
RAB40B-202ENST00000538809 ROPN1LQ96C74 230 aa13.36□□□□□ -0.27
RAB40B-202ENST00000538809 MBD6Q96DN6 1003 aa13.36□□□□□ -0.27
RAB40B-202ENST00000538809 MRGPRX4Q96LA9 322 aa13.36□□□□□ -0.27
RAB40B-202ENST00000538809 ALPK1Q96QP1 1244 aa13.36□□□□□ -0.27
RAB40B-202ENST00000538809 OR52E6Q96RD3 313 aa13.36□□□□□ -0.27
RAB40B-202ENST00000538809 THUMPD3Q9BV44 507 aaKnown RBP13.36□□□□□ -0.27
RAB40B-202ENST00000538809 LAT2Q9GZY6 243 aa13.36□□□□□ -0.27
RAB40B-202ENST00000538809 QRSL1Q9H0R6 528 aaKnown RBP13.36□□□□□ -0.27
RAB40B-202ENST00000538809 SLCO1B3Q9NPD5 702 aa13.36□□□□□ -0.27
RAB40B-202ENST00000538809 POLE3Q9NRF9 147 aa13.36□□□□□ -0.27
RAB40B-202ENST00000538809 SLC6A13Q9NSD5 602 aa13.36□□□□□ -0.27
RAB40B-202ENST00000538809 ZNF226Q9NYT6 803 aa13.36□□□□□ -0.27
RAB40B-202ENST00000538809 WDR45Q9Y484 360 aa13.36□□□□□ -0.27
RAB40B-202ENST00000538809 MTORP42345 2549 aa13.36□□□□□ -0.27
RAB40B-202ENST00000538809 GJE1A6NN92 205 aa13.35□□□□□ -0.27
RAB40B-202ENST00000538809 SLC22A3O75751 556 aa13.35□□□□□ -0.27
RAB40B-202ENST00000538809 SLC7A1P30825 629 aa13.35□□□□□ -0.27
RAB40B-202ENST00000538809 MVDP53602 400 aa13.35□□□□□ -0.27
RAB40B-202ENST00000538809 DEFB113Q30KQ7 82 aa13.35□□□□□ -0.27
RAB40B-202ENST00000538809 TIGD2Q4W5G0 525 aa13.35□□□□□ -0.27
RAB40B-202ENST00000538809 GPAT3Q53EU6 434 aa13.35□□□□□ -0.27
RAB40B-202ENST00000538809 DNAJC14Q6Y2X3 702 aaPredicted RBP13.35□□□□□ -0.27
RAB40B-202ENST00000538809 STAC2Q6ZMT1 411 aa13.35□□□□□ -0.27
RAB40B-202ENST00000538809 FCRLAQ7L513 359 aa13.35□□□□□ -0.27
RAB40B-202ENST00000538809 RNF130Q86XS8 419 aa13.35□□□□□ -0.27
RAB40B-202ENST00000538809 OR9I1Q8NGQ6 314 aa13.35□□□□□ -0.27
RAB40B-202ENST00000538809 PNPT1Q8TCS8 783 aaKnown RBP13.35□□□□□ -0.27
RAB40B-202ENST00000538809 CPNE4Q96A23 557 aaPredicted RBP13.35□□□□□ -0.27
RAB40B-202ENST00000538809 REXO5Q96IC2 774 aaKnown RBP13.35□□□□□ -0.27
RAB40B-202ENST00000538809 HS3ST6Q96QI5 342 aa13.35□□□□□ -0.27
RAB40B-202ENST00000538809 PANX1Q96RD7 426 aa13.35□□□□□ -0.27
RAB40B-202ENST00000538809 ZBTB18Q99592 522 aa13.35□□□□□ -0.27
RAB40B-202ENST00000538809 VIPAS39Q9H9C1 493 aa13.35□□□□□ -0.27
RAB40B-202ENST00000538809 PLSCR4Q9NRQ2 329 aa13.35□□□□□ -0.27
RAB40B-202ENST00000538809 GLRX2Q9NS18 164 aa13.35□□□□□ -0.27
RAB40B-202ENST00000538809 VPS13CQ709C8 3753 aa13.34□□□□□ -0.27
RAB40B-202ENST00000538809 UBDO15205 165 aa13.34□□□□□ -0.27
RAB40B-202ENST00000538809 H6PDO95479 791 aa13.34□□□□□ -0.27
RAB40B-202ENST00000538809 IL6P05231 212 aa13.34□□□□□ -0.27
RAB40B-202ENST00000538809 GSNP06396 782 aa13.34□□□□□ -0.27
RAB40B-202ENST00000538809 CD99P14209 185 aa13.34□□□□□ -0.27
RAB40B-202ENST00000538809 CD53P19397 219 aa13.34□□□□□ -0.27
RAB40B-202ENST00000538809 KLK2P20151 261 aa13.34□□□□□ -0.27
RAB40B-202ENST00000538809 PGM1P36871 562 aa13.34□□□□□ -0.27
RAB40B-202ENST00000538809 SESN3P58005 492 aa13.34□□□□□ -0.27
RAB40B-202ENST00000538809 PPP2R2AP63151 447 aa13.34□□□□□ -0.27
RAB40B-202ENST00000538809 TXNL4AP83876 142 aaKnown RBP13.34□□□□□ -0.27
RAB40B-202ENST00000538809 HPCAP84074 193 aa13.34□□□□□ -0.27
RAB40B-202ENST00000538809 FOXD4Q12950 439 aaPredicted RBP13.34□□□□□ -0.27
RAB40B-202ENST00000538809 MAPK11Q15759 364 aa13.34□□□□□ -0.27
RAB40B-202ENST00000538809 C3orf33Q6P1S2 294 aa13.34□□□□□ -0.27
RAB40B-202ENST00000538809 MSANTD1Q6ZTZ1 278 aa13.34□□□□□ -0.27
RAB40B-202ENST00000538809 EIF3MQ7L2H7 374 aaKnown RBP13.34□□□□□ -0.27
RAB40B-202ENST00000538809 NUFIP2Q7Z417 695 aaKnown RBP13.34□□□□□ -0.27
RAB40B-202ENST00000538809 TUSC5Q8IXB3 177 aa13.34□□□□□ -0.27
RAB40B-202ENST00000538809 ZNF619Q8N2I2 560 aa13.34□□□□□ -0.27
RAB40B-202ENST00000538809 TRIML2Q8N7C3 387 aa13.34□□□□□ -0.27
RAB40B-202ENST00000538809 ZG16BQ96DA0 208 aa13.34□□□□□ -0.27
RAB40B-202ENST00000538809 OR5B2Q96R09 309 aa13.34□□□□□ -0.27
RAB40B-202ENST00000538809 TMUB1Q9BVT8 246 aa13.34□□□□□ -0.27
RAB40B-202ENST00000538809 SLC38A1Q9H2H9 487 aa13.34□□□□□ -0.27
RAB40B-202ENST00000538809 UBTD1Q9HAC8 227 aa13.34□□□□□ -0.27
RAB40B-202ENST00000538809 TIGARQ9NQ88 270 aa13.34□□□□□ -0.27
RAB40B-202ENST00000538809 CLDN24A6NM45 220 aa13.33□□□□□ -0.28
RAB40B-202ENST00000538809 HMGB1P1B2RPK0 211 aaPredicted RBP13.33□□□□□ -0.28
RAB40B-202ENST00000538809 DIAPH2O60879 1101 aa13.33□□□□□ -0.28
RAB40B-202ENST00000538809 TGDSO95455 350 aa13.33□□□□□ -0.28
RAB40B-202ENST00000538809 THBDP07204 575 aa13.33□□□□□ -0.28
RAB40B-202ENST00000538809 CHRM4P08173 479 aa13.33□□□□□ -0.28
RAB40B-202ENST00000538809 ZCCHC18P0CG32 403 aa13.33□□□□□ -0.28
RAB40B-202ENST00000538809 PGCP20142 388 aa13.33□□□□□ -0.28
RAB40B-202ENST00000538809 ENPP1P22413 925 aa13.33□□□□□ -0.28
RAB40B-202ENST00000538809 CHRNEQ04844 493 aa13.33□□□□□ -0.28
RAB40B-202ENST00000538809 MERTKQ12866 999 aa13.33□□□□□ -0.28
RAB40B-202ENST00000538809 SYPL1Q16563 259 aa13.33□□□□□ -0.28
RAB40B-202ENST00000538809 COX20Q5RI15 118 aa13.33□□□□□ -0.28
RAB40B-202ENST00000538809 TMEM201Q5SNT2 666 aa13.33□□□□□ -0.28
RAB40B-202ENST00000538809 GTF2IRD2BQ6EKJ0 949 aa13.33□□□□□ -0.28
RAB40B-202ENST00000538809 ZNF621Q6ZSS3 439 aa13.33□□□□□ -0.28
RAB40B-202ENST00000538809 BEND4Q6ZU67 534 aa13.33□□□□□ -0.28
RAB40B-202ENST00000538809 HDXQ7Z353 690 aa13.33□□□□□ -0.28
RAB40B-202ENST00000538809 GTF2IRD2Q86UP8 949 aa13.33□□□□□ -0.28
RAB40B-202ENST00000538809 STK32CQ86UX6 486 aa13.33□□□□□ -0.28
RAB40B-202ENST00000538809 ANKFN1Q8N957 763 aa13.33□□□□□ -0.28
RAB40B-202ENST00000538809 LRRC8CQ8TDW0 803 aa13.33□□□□□ -0.28
RAB40B-202ENST00000538809 ST8SIA1Q92185 356 aa13.33□□□□□ -0.28
RAB40B-202ENST00000538809 DNAJA3Q96EY1 480 aa13.33□□□□□ -0.28
RAB40B-202ENST00000538809 TRNT1Q96Q11 434 aaKnown RBP13.33□□□□□ -0.28
RAB40B-202ENST00000538809 EBF4Q9BQW3 602 aa13.33□□□□□ -0.28
RAB40B-202ENST00000538809 KLHL13Q9P2N7 655 aa13.33□□□□□ -0.28
RAB40B-202ENST00000538809 SETD2Q9BYW2 2564 aaPredicted RBP13.32□□□□□ -0.28
RAB40B-202ENST00000538809 RFXANKO14593 260 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms