RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 ZNF544Q6NX49 715 aa22.96■■□□□ 1.27
RAB40C-204ENST00000538492 METTL27Q8N6F8 245 aaPredicted RBP22.96■■□□□ 1.27
RAB40C-204ENST00000538492 PMM1Q92871 262 aa22.96■■□□□ 1.27
RAB40C-204ENST00000538492 FBXL21Q9UKT6 434 aa22.96■■□□□ 1.27
RAB40C-204ENST00000538492 SLC35A3Q9Y2D2 325 aa22.96■■□□□ 1.27
RAB40C-204ENST00000538492 SLC22A31A6NKX4 558 aa22.96■■□□□ 1.27
RAB40C-204ENST00000538492 CCR5P51681 352 aa22.96■■□□□ 1.27
RAB40C-204ENST00000538492 CRYZQ08257 329 aaKnown RBP22.96■■□□□ 1.27
RAB40C-204ENST00000538492 GALEQ14376 348 aa22.96■■□□□ 1.27
RAB40C-204ENST00000538492 ZNF267Q14586 743 aaPredicted RBP22.96■■□□□ 1.27
RAB40C-204ENST00000538492 NDUFAF6Q330K2 333 aa22.96■■□□□ 1.27
RAB40C-204ENST00000538492 ARL9Q6T311 187 aa22.96■■□□□ 1.27
RAB40C-204ENST00000538492 RCBTB1Q8NDN9 531 aa22.96■■□□□ 1.27
RAB40C-204ENST00000538492 HOXB13Q92826 284 aaPredicted RBP22.96■■□□□ 1.27
RAB40C-204ENST00000538492 NECTIN4Q96NY8 510 aa22.96■■□□□ 1.27
RAB40C-204ENST00000538492 LMF2Q9BU23 707 aaKnown RBP22.96■■□□□ 1.27
RAB40C-204ENST00000538492 RGS9O75916 674 aaPredicted RBP22.96■■□□□ 1.27
RAB40C-204ENST00000538492 PPM1FP49593 454 aaPredicted RBP22.96■■□□□ 1.27
RAB40C-204ENST00000538492 NR2C2APQ86WQ0 139 aa22.96■■□□□ 1.27
RAB40C-204ENST00000538492 OR5W2Q8NH69 310 aa22.96■■□□□ 1.27
RAB40C-204ENST00000538492 VSTM2LQ96N03 204 aa22.96■■□□□ 1.27
RAB40C-204ENST00000538492 FOXS1O43638 330 aa22.95■■□□□ 1.26
RAB40C-204ENST00000538492 PGDP52209 483 aa22.95■■□□□ 1.26
RAB40C-204ENST00000538492 IL18Q14116 193 aa22.95■■□□□ 1.26
RAB40C-204ENST00000538492 NPSR1Q6W5P4 371 aa22.95■■□□□ 1.26
RAB40C-204ENST00000538492 KLHDC7BQ96G42 594 aa22.95■■□□□ 1.26
RAB40C-204ENST00000538492 MAP3K3Q99759 626 aa22.95■■□□□ 1.26
RAB40C-204ENST00000538492 TTTY10Q9BZA0 68 aa22.95■■□□□ 1.26
RAB40C-204ENST00000538492 PPIL3Q9H2H8 161 aaKnown RBP22.95■■□□□ 1.26
RAB40C-204ENST00000538492 TRIM36Q9NQ86 728 aa22.95■■□□□ 1.26
RAB40C-204ENST00000538492 PLA2G10O15496 165 aa22.95■■□□□ 1.26
RAB40C-204ENST00000538492 RNH1P13489 461 aaKnown RBP22.95■■□□□ 1.26
RAB40C-204ENST00000538492 BDH1Q02338 343 aa22.95■■□□□ 1.26
RAB40C-204ENST00000538492 FAM27D1Q5T7N8 215 aa22.95■■□□□ 1.26
RAB40C-204ENST00000538492 PARGQ86W56 976 aa22.95■■□□□ 1.26
RAB40C-204ENST00000538492 Q8N402 240 aa22.95■■□□□ 1.26
RAB40C-204ENST00000538492 DEFB119Q8N690 84 aa22.95■■□□□ 1.26
RAB40C-204ENST00000538492 Q8N9G6 341 aaPredicted RBP22.95■■□□□ 1.26
RAB40C-204ENST00000538492 OR6F1Q8NGZ6 308 aa22.95■■□□□ 1.26
RAB40C-204ENST00000538492 ADGRL4Q9HBW9 690 aa22.95■■□□□ 1.26
RAB40C-204ENST00000538492 MCCC2Q9HCC0 563 aa22.95■■□□□ 1.26
RAB40C-204ENST00000538492 A8MV72 311 aaPredicted RBP22.94■■□□□ 1.26
RAB40C-204ENST00000538492 SLC2A2P11168 524 aaPredicted RBP22.94■■□□□ 1.26
RAB40C-204ENST00000538492 CHRNB1P11230 501 aa22.94■■□□□ 1.26
RAB40C-204ENST00000538492 ZNF3P17036 446 aa22.94■■□□□ 1.26
RAB40C-204ENST00000538492 MAOAP21397 527 aa22.94■■□□□ 1.26
RAB40C-204ENST00000538492 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.94■■□□□ 1.26
RAB40C-204ENST00000538492 RPTNQ6XPR3 784 aa22.94■■□□□ 1.26
RAB40C-204ENST00000538492 KIAA1143Q96AT1 154 aaPredicted RBP22.94■■□□□ 1.26
RAB40C-204ENST00000538492 MEIOCA2RUB1 952 aa22.94■■□□□ 1.26
RAB40C-204ENST00000538492 PRKNO60260 465 aaPredicted RBP22.94■■□□□ 1.26
RAB40C-204ENST00000538492 IFI6P09912 130 aa22.94■■□□□ 1.26
RAB40C-204ENST00000538492 SBK2P0C263 348 aa22.94■■□□□ 1.26
RAB40C-204ENST00000538492 E2F1Q01094 437 aa22.94■■□□□ 1.26
RAB40C-204ENST00000538492 PRTGQ2VWP7 1150 aa22.94■■□□□ 1.26
RAB40C-204ENST00000538492 KIRREL2Q6UWL6 708 aa22.94■■□□□ 1.26
RAB40C-204ENST00000538492 RTL4Q6ZR62 310 aa22.94■■□□□ 1.26
RAB40C-204ENST00000538492 C4orf36Q96KX1 117 aa22.94■■□□□ 1.26
RAB40C-204ENST00000538492 ZNF426Q9BUY5 554 aa22.94■■□□□ 1.26
RAB40C-204ENST00000538492 TRIM2Q9C040 744 aa22.94■■□□□ 1.26
RAB40C-204ENST00000538492 KCNN2Q9H2S1 579 aa22.94■■□□□ 1.26
RAB40C-204ENST00000538492 PPP1R3EQ9H7J1 279 aa22.94■■□□□ 1.26
RAB40C-204ENST00000538492 NPAP1Q9NZP6 1156 aa22.94■■□□□ 1.26
RAB40C-204ENST00000538492 HEATR5AQ86XA9 2040 aa22.93■■□□□ 1.26
RAB40C-204ENST00000538492 J3QLW9 94 aa22.93■■□□□ 1.26
RAB40C-204ENST00000538492 KRT8P05787 483 aa22.93■■□□□ 1.26
RAB40C-204ENST00000538492 ZNF19P17023 458 aa22.93■■□□□ 1.26
RAB40C-204ENST00000538492 EVX1P49640 407 aa22.93■■□□□ 1.26
RAB40C-204ENST00000538492 SLC3A1Q07837 685 aa22.93■■□□□ 1.26
RAB40C-204ENST00000538492 FHL1Q13642 323 aa22.93■■□□□ 1.26
RAB40C-204ENST00000538492 IDNKQ5T6J7 187 aa22.93■■□□□ 1.26
RAB40C-204ENST00000538492 GRAMD2AQ8IUY3 354 aa22.93■■□□□ 1.26
RAB40C-204ENST00000538492 NDC1Q9BTX1 674 aa22.93■■□□□ 1.26
RAB40C-204ENST00000538492 TPSD1Q9BZJ3 242 aa22.93■■□□□ 1.26
RAB40C-204ENST00000538492 NEK6Q9HC98 313 aa22.93■■□□□ 1.26
RAB40C-204ENST00000538492 B3GAT2Q9NPZ5 323 aa22.93■■□□□ 1.26
RAB40C-204ENST00000538492 WSB2Q9NYS7 404 aaPredicted RBP22.93■■□□□ 1.26
RAB40C-204ENST00000538492 LRIT1Q9P2V4 623 aa22.93■■□□□ 1.26
RAB40C-204ENST00000538492 ZNF221Q9UK13 617 aa22.93■■□□□ 1.26
RAB40C-204ENST00000538492 ZMIZ1Q9ULJ6 1067 aa22.93■■□□□ 1.26
RAB40C-204ENST00000538492 LRRN3E7EW58 273 aa22.93■■□□□ 1.26
RAB40C-204ENST00000538492 MT-ND5P03915 603 aa22.93■■□□□ 1.26
RAB40C-204ENST00000538492 HK1P19367 917 aa22.93■■□□□ 1.26
RAB40C-204ENST00000538492 SLC2A5P22732 501 aa22.93■■□□□ 1.26
RAB40C-204ENST00000538492 OR12D2P58182 307 aa22.93■■□□□ 1.26
RAB40C-204ENST00000538492 SMPDL3BQ92485 455 aa22.93■■□□□ 1.26
RAB40C-204ENST00000538492 LRRN3Q9H3W5 708 aa22.93■■□□□ 1.26
RAB40C-204ENST00000538492 PRTFDC1Q9NRG1 225 aa22.93■■□□□ 1.26
RAB40C-204ENST00000538492 GPR27Q9NS67 375 aa22.93■■□□□ 1.26
RAB40C-204ENST00000538492 A0A1W2PPC4 97 aa22.92■■□□□ 1.26
RAB40C-204ENST00000538492 GAAP10253 952 aa22.92■■□□□ 1.26
RAB40C-204ENST00000538492 PEPDP12955 493 aa22.92■■□□□ 1.26
RAB40C-204ENST00000538492 BLKP51451 505 aa22.92■■□□□ 1.26
RAB40C-204ENST00000538492 HCCSP53701 268 aa22.92■■□□□ 1.26
RAB40C-204ENST00000538492 ATAD3CQ5T2N8 411 aa22.92■■□□□ 1.26
RAB40C-204ENST00000538492 EFHD2Q96C19 240 aaPredicted RBP22.92■■□□□ 1.26
RAB40C-204ENST00000538492 DGAT2Q96PD7 388 aa22.92■■□□□ 1.26
RAB40C-204ENST00000538492 ERMAPQ96PL5 475 aaPredicted RBP22.92■■□□□ 1.26
RAB40C-204ENST00000538492 SOSTQ9BQB4 213 aa22.92■■□□□ 1.26
RAB40C-204ENST00000538492 ERVK-19Q9WJR5 959 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms