RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 CCDC36Q8IYA8 594 aa5□□□□□ -1.61
LRP6-203ENST00000538239 ZNF610Q8N9Z0 462 aa5□□□□□ -1.61
LRP6-203ENST00000538239 OR2T11Q8NH01 316 aa5□□□□□ -1.61
LRP6-203ENST00000538239 THAP6Q8TBB0 222 aa5□□□□□ -1.61
LRP6-203ENST00000538239 HDAC2Q92769 488 aaKnown RBP5□□□□□ -1.61
LRP6-203ENST00000538239 ZNF175Q9Y473 711 aa5□□□□□ -1.61
LRP6-203ENST00000538239 LOXHD1Q8IVV2 1947 aa5□□□□□ -1.61
LRP6-203ENST00000538239 SERINC4A6NH21 518 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 H0YAE9 185 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 FANCGO15287 622 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 ACTL6BO94805 426 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 GLB1P16278 677 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 RBMXP38159 391 aaKnown RBP4.99□□□□□ -1.61
LRP6-203ENST00000538239 RBM34P42696 430 aaKnown RBP4.99□□□□□ -1.61
LRP6-203ENST00000538239 CD97P48960 835 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 MZT1Q08AG7 82 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 RUNDC3AQ59EK9 446 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 PIGGQ5H8A4 983 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 COQ5Q5HYK3 327 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 PODNL1Q6PEZ8 512 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 ASRGL1Q7L266 308 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 KANSL1Q7Z3B3 1105 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 TRIM46Q7Z4K8 759 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 ZNF687Q8N1G0 1237 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 UCN3Q969E3 161 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 SLC46A1Q96NT5 459 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 TRIB1Q96RU8 372 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 ALG8Q9BVK2 526 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 VN1R3Q9BXE9 311 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 WNT16Q9UBV4 365 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 B3GALT1Q9Y5Z6 326 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 COL5A3P25940 1745 aaPredicted RBP4.99□□□□□ -1.61
LRP6-203ENST00000538239 METTL12A8MUP2 240 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 H0YJX3 145 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 DOK2O60496 412 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 IGHV3-9P01782 118 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 NPR2P20594 1047 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 GABRB3P28472 473 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 HTRA4P83105 476 aaPredicted RBP4.99□□□□□ -1.61
LRP6-203ENST00000538239 LTC4SQ16873 150 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 ASTLQ6HA08 431 aaPredicted RBP4.99□□□□□ -1.61
LRP6-203ENST00000538239 LCN8Q6JVE9 175 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 SYCE2Q6PIF2 218 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 PRICKLE2Q7Z3G6 844 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 YRDCQ86U90 279 aaKnown RBP4.99□□□□□ -1.61
LRP6-203ENST00000538239 ZNF566Q969W8 418 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 GPR45Q9Y5Y3 372 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 TMED7-TICAM2A0A0A6YYA0 188 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 DCDC2BA2VCK2 349 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 H0YIV9 168 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 GLSO94925 669 aaPredicted RBP4.99□□□□□ -1.61
LRP6-203ENST00000538239 IGLV3-27P01718 113 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 RAB3AP20336 220 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 MAGEA12P43365 314 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 GFERP55789 205 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 FXYD4P59646 89 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 PCBD1P61457 104 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 BDH1Q02338 343 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 LRRC37A5PQ49AS3 106 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 GARNL3Q5VVW2 1013 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 DHRS13Q6UX07 377 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 SERPINA11Q86U17 422 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 OR6Q1Q8NGQ2 317 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 KCNE4Q8WWG9 221 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 BIRC8Q96P09 236 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 SLC30A2Q9BRI3 323 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 ZNF471Q9BX82 626 aaPredicted RBP4.99□□□□□ -1.61
LRP6-203ENST00000538239 TXLNGYQ9BZA5 131 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 TMED7Q9Y3B3 224 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 ATG4BQ9Y4P1 393 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 LOC105369274A0A096LPK9 316 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 TRGV8A0A0C4DH27 118 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 CTNSO60931 367 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 RBBP9O75884 186 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 MT-ND2P03891 347 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 UCHL1P09936 223 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 HSD17B1P14061 328 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 PPIAP62937 165 aaKnown RBP4.99□□□□□ -1.61
LRP6-203ENST00000538239 SLC35A1P78382 337 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 UBE2UQ5VVX9 321 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 FAM83HQ6ZRV2 1179 aaPredicted RBP4.99□□□□□ -1.61
LRP6-203ENST00000538239 ELMOD2Q8IZ81 293 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 OR4N4Q8N0Y3 316 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 DTWD2Q8NBA8 298 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 OR7G1Q8NGA0 311 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 OR13C2Q8NGS9 318 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 HSD17B8Q92506 261 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 ZNF700Q9H0M5 742 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 FAM86C1Q9NVL1 165 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 CSF2P04141 144 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 ZDHHC11BP0C7U3 371 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 MTHFD2P13995 350 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 NPPBP16860 134 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 DCKP27707 260 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 METAP1P53582 386 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 PSMA6P60900 246 aaKnown RBP4.99□□□□□ -1.61
LRP6-203ENST00000538239 CD83Q01151 205 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 SPHARQ15513 63 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 GGTA1PQ4G0N0 100 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 C6orf141Q5SZD1 244 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms