RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 GRIP1Q9Y3R0 1128 aa9.93□□□□□ -0.82
CLIP1-210ENST00000538120 RHPN2P1A8MT19 583 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 NOTOA8MTQ0 251 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 J3KRW8 73 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 KLF4O43474 513 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 PRKYO43930 277 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 BRINP1O60477 761 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 IGKV1D-16P01601 117 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 DBIP07108 87 aaKnown RBP9.92□□□□□ -0.82
CLIP1-210ENST00000538120 HTR2AP28223 471 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 EPHA4P54764 986 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 POU6F2P78424 691 aaPredicted RBP9.92□□□□□ -0.82
CLIP1-210ENST00000538120 PSG6Q00889 435 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 CD83Q01151 205 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 GALK2Q01415 458 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 MLLT1Q03111 559 aaPredicted RBP9.92□□□□□ -0.82
CLIP1-210ENST00000538120 KCNAB1Q14722 419 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 SPHARQ15513 63 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 CCDC58Q4VC31 144 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 GARNL3Q5VVW2 1013 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 ZNF595Q8IYB9 648 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 TCEANCQ8N8B7 351 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 PRSS27Q9BQR3 290 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 LMF2Q9BU23 707 aaKnown RBP9.92□□□□□ -0.82
CLIP1-210ENST00000538120 C11orf54Q9H0W9 315 aaPredicted RBP9.92□□□□□ -0.82
CLIP1-210ENST00000538120 MIXL1Q9H2W2 232 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 FOLH1BQ9HBA9 442 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 PDE7BQ9NP56 450 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 PRTFDC1Q9NRG1 225 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 SOHLH2Q9NX45 425 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 TVP23BQ9NYZ1 205 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 CNIH4Q9P003 139 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 DTX4Q9Y2E6 619 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 YARS2Q9Y2Z4 477 aaKnown RBP9.92□□□□□ -0.82
CLIP1-210ENST00000538120 A0A1B0GVT2 93 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 CDHR4A6H8M9 788 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 BCAT2O15382 392 aaPredicted RBP9.92□□□□□ -0.82
CLIP1-210ENST00000538120 GFRA3O60609 400 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 CDRT1O95170 752 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 GKN3PP0CG01 181 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 PIPP12273 146 aaPredicted RBP9.92□□□□□ -0.82
CLIP1-210ENST00000538120 MYF5P13349 255 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 NID1P14543 1247 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 GSTM3P21266 225 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 RORCP51449 518 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 ZNF155Q12901 538 aaPredicted RBP9.92□□□□□ -0.82
CLIP1-210ENST00000538120 TSPAN31Q12999 210 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 SHBQ15464 509 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 OCLNQ16625 522 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 MRPL2Q5T653 305 aaKnown RBP9.92□□□□□ -0.82
CLIP1-210ENST00000538120 FAM131AQ6UXB0 335 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 CASP12Q6UXS9 341 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 ZNF730Q6ZMV8 503 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 MRGPREQ86SM8 312 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 GLCCI1Q86VQ1 547 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 OR4N2Q8NGD1 307 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 OR6C4Q8NGE1 309 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 OR8J1Q8NGP2 316 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 SETD6Q8TBK2 473 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 TMEM255BQ8WV15 326 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 ACOT11Q8WXI4 607 aaPredicted RBP9.92□□□□□ -0.82
CLIP1-210ENST00000538120 RIT1Q92963 219 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 MMABQ96EY8 250 aaPredicted RBP9.92□□□□□ -0.82
CLIP1-210ENST00000538120 ZDHHC12Q96GR4 267 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 FAM46AQ96IP4 442 aaKnown RBP9.92□□□□□ -0.82
CLIP1-210ENST00000538120 VSTM2LQ96N03 204 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 POLDIP3Q9BY77 421 aaKnown RBP9.92□□□□□ -0.82
CLIP1-210ENST00000538120 POLR2J2Q9GZM3 115 aaKnown RBP9.92□□□□□ -0.82
CLIP1-210ENST00000538120 MAU2Q9Y6X3 613 aa9.92□□□□□ -0.82
CLIP1-210ENST00000538120 IGHV1OR21-1A0A087WYE8 117 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 HMX3A6NHT5 357 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 CENPBD1B2RD01 187 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 ZNF670-ZNF695F2Z2N8 137 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 AK1P00568 194 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 CSF3P09919 207 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 MAOAP21397 527 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 PSMA1P25786 263 aaKnown RBP9.91□□□□□ -0.82
CLIP1-210ENST00000538120 CSTF2P33240 577 aaKnown RBP eCLIP9.91□□□□□ -0.82
CLIP1-210ENST00000538120 AFF3P51826 1226 aaKnown RBP9.91□□□□□ -0.82
CLIP1-210ENST00000538120 BNC1Q01954 994 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 STX4Q12846 297 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 FLYWCH1Q4VC44 716 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 EIPR1Q53HC9 387 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 SLC25A30Q5SVS4 291 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 PAMR1Q6UXH9 720 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 RASSF6Q6ZTQ3 369 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 MBOAT2Q6ZWT7 520 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 SLC35F3Q8IY50 421 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 FAM26EQ8N5C1 309 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 POGLUT1Q8NBL1 392 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 SLC7A6Q92536 515 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 POLE3Q9NRF9 147 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 SLC7A7Q9UM01 511 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 SIT1Q9Y3P8 196 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 THADAQ6YHU6 1953 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 BLACEA4D250 179 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 TLX2O43763 284 aaPredicted RBP9.91□□□□□ -0.82
CLIP1-210ENST00000538120 APOL3O95236 402 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 PAHP00439 452 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 GPR3P46089 330 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms