RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 CELA2AP08217 269 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SBK2P0C263 348 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 FAM90A13PP0C7W8 464 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 FAM90A24PP0C7X0 464 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 PRKAR1AP10644 381 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TFPIP10646 304 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 LIPCP11150 499 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 LYL1P12980 280 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 FBLP22087 321 aaKnown RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 NDUFS1P28331 727 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 HNRNPH1P31943 449 aaKnown RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SHMT2P34897 504 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 DEKP35659 375 aaKnown RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 DLSTP36957 453 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SLC26A3P40879 764 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 NR0B1P51843 470 aaKnown RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 HNRNPFP52597 415 aaKnown RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 RAB10P61026 200 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TBPL1P62380 186 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 RAE1P78406 368 aaKnown RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 MAT1AQ00266 395 aaKnown RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 PLOD1Q02809 727 aaPredicted RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CFHR3Q02985 330 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CAV1Q03135 178 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CALCOCO2Q13137 446 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 DDX39BQ13838 428 aaKnown RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 KIR2DS3Q14952 304 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 KPNB1Q14974 876 aaKnown RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ARHGAP19Q14CB8 494 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 MFSD13AQ14CX5 517 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TGFBIQ15582 683 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SSX2Q16385 188 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SRSF7Q16629 238 aaKnown RBP eCLIP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SLC5A12Q1EHB4 618 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 HFEQ30201 348 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 DEFB109BQ30KR1 87 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 IQCCQ4KMZ1 466 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SYTL3Q4VX76 610 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 RNASE12Q5GAN4 147 aaKnown RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 VWA2Q5GFL6 755 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 GRTP1Q5TC63 336 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TMEM211Q6ICI0 200 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 RHBDD2Q6NTF9 364 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 C8orf74Q6P047 294 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CEACAM20Q6UY09 585 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 MEX3BQ6ZN04 569 aaKnown RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TIFABQ6ZNK6 161 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SHISA6Q6ZSJ9 500 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CCDC190Q86UF4 302 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 GPR180Q86V85 440 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 THOC6Q86W42 341 aaKnown RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SLC26A11Q86WA9 606 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 KMT5CQ86Y97 462 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TDRPQ86YL5 185 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CTAGE3PQ8IX95 158 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 IQCF2Q8IXL9 164 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 KLHDC8AQ8IYD2 350 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 IQCKQ8N0W5 287 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 LSMEM2Q8N112 164 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ZNF843Q8N446 348 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 PAPD5Q8NDF8 572 aaKnown RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 OR5T3Q8NGG3 340 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 OR9A4Q8NGU2 314 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TRPC4APQ8TEL6 797 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 C2CD4CQ8TF44 421 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 WIPF2Q8TF74 440 aaPredicted RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 AENQ8WTP8 325 aaKnown RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SKA2Q8WVK7 121 aaPredicted RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 FAR1Q8WVX9 515 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SMPDL3AQ92484 453 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 PSMF1Q92530 271 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 BCL2L2Q92843 193 aaPredicted RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 RAD51AP1Q96B01 352 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 MOB3AQ96BX8 217 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SNRNP40Q96DI7 357 aaKnown RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SLC45A3Q96JT2 553 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SAMD8Q96LT4 415 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 PANX3Q96QZ0 392 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 FMO2Q99518 471 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 NPAS2Q99743 824 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 WDR77Q9BQA1 342 aaPredicted RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 C17orf62Q9BQA9 187 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CCDC77Q9BR77 488 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 EFHD1Q9BUP0 239 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 KATNB1Q9BVA0 655 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ZNF416Q9BWM5 594 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CACNG6Q9BXT2 260 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CAPS2Q9BXY5 557 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ZNF717Q9BY31 904 aaPredicted RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 PARD6BQ9BYG5 372 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 IQCGQ9H095 443 aaKnown RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ACTL8Q9H568 366 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 MAGIXQ9H6Y5 334 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ACTR5Q9H9F9 607 aaPredicted RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 FAM114A2Q9NRY5 505 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CHCHD3Q9NX63 227 aaKnown RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SLCO1C1Q9NYB5 712 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TAS2R13Q9NYV9 303 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TMEM216Q9P0N5 145 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms