RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 SYT12Q8IV01 421 aa10.15□□□□□ -0.79
CLSTN3-207ENST00000537408 ASB13Q8WXK3 278 aa10.15□□□□□ -0.79
CLSTN3-207ENST00000537408 DMRTA2Q96SC8 542 aa10.15□□□□□ -0.79
CLSTN3-207ENST00000537408 FAM120CQ9NX05 1096 aaKnown RBP10.15□□□□□ -0.79
CLSTN3-207ENST00000537408 COMMD9Q9P000 198 aa10.15□□□□□ -0.79
CLSTN3-207ENST00000537408 GREB1LQ9C091 1923 aaPredicted RBP10.15□□□□□ -0.79
CLSTN3-207ENST00000537408 TP53BP1Q12888 1972 aaPredicted RBP10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 RFPL4AA6NLU0 287 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 E7EQ34 232 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 RFPL4AL1F8VTS6 287 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 GOSR2O14653 212 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 PCDH8O95206 1070 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 IFNGP01579 166 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 G0S2P27469 103 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 GKP32189 559 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 DDX39BQ13838 428 aaKnown RBP10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 PTPRNQ16849 979 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 DCST1Q5T197 706 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 ARMC12Q5T9G4 340 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 C18orf63Q68DL7 685 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 OR52W1Q6IF63 320 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 LINGO2Q7L985 606 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 FBXO17Q96EF6 278 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 H7C1Q1 480 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 WNT1P04628 370 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 ANXA2P07355 339 aaKnown RBP10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 PIRTP0C851 137 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 ACP2P11117 423 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 CEBPBP17676 345 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 PRPS1L1P21108 318 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 BDKRB2P30411 391 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 HTR5AP47898 357 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 SEC13P55735 322 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 SGCGQ13326 291 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 TOMM20Q15388 145 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 ELFN2Q5R3F8 820 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 ZNF783Q6ZMS7 281 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 OR2W3Q7Z3T1 314 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 SLC44A3Q8N4M1 653 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 FAM122AQ96E09 287 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 TP53TG5Q9Y2B4 290 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 OR2AT4A6NND4 320 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 NPIPB9F8W1W9 429 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 MST1P26927 711 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 PPIAP62937 165 aaKnown RBP10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 XKR6Q5GH73 641 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 KRBOX4Q5JUW0 171 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 OTUD1Q5VV17 481 aaPredicted RBP10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 ZNF626Q68DY1 528 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 SLC36A4Q6YBV0 504 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 NUDT13Q86X67 352 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 CACUL1Q86Y37 369 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 GTPBP8Q8N3Z3 284 aaPredicted RBP10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 OR1S2Q8NGQ3 325 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 LRFN5Q96NI6 719 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 ARHGAP9Q9BRR9 750 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 ZDHHC4Q9NPG8 344 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 HCFC1R1Q9NWW0 138 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 PISDQ9UG56 409 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 OPN4Q9UHM6 478 aa10.14□□□□□ -0.79
CLSTN3-207ENST00000537408 M0R296 226 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 OR7A17O14581 309 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 TNFRSF10BO14763 440 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 RBBP9O75884 186 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 RAB3DO95716 219 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 IFNA2P01563 188 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 EPHX1P07099 455 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 TFPIP10646 304 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 ACHEP22303 614 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 LUMP51884 338 aaPredicted RBP10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 SORDQ00796 357 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 SKP2Q13309 424 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 C12orf73Q69YU5 71 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 ARRDC1Q8N5I2 433 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 SUSD2Q9UGT4 822 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 CAMK2AQ9UQM7 478 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 RCE1Q9Y256 329 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 ENPP4Q9Y6X5 453 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 GUCA1CO95843 209 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 GALP22466 123 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 MPGP29372 298 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 FAUP35544 74 aaKnown RBP10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 SMIM11AP58511 58 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 YBEYP58557 167 aaPredicted RBP10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 E2F1Q01094 437 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 ZBTB6Q15916 424 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 HEPHL1Q6MZM0 1159 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 TMEM71Q6P5X7 295 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 FAM26EQ8N5C1 309 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 FBXO15Q8NCQ5 510 aaPredicted RBP10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 SMRP1Q8NCR6 262 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 ZNF354BQ96LW1 612 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 ACER3Q9NUN7 267 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 COLCA2A8K830 154 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 C2CD4DB7Z1M9 353 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 LEFTY2O00292 366 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 PKMP14618 531 aaKnown RBP10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 NOS3P29474 1203 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 SERPINA4P29622 427 aa10.13□□□□□ -0.79
CLSTN3-207ENST00000537408 CRABP1P29762 137 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms