RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 TGFBR1P36897 503 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 TAS2R43P59537 309 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 FOXK2Q01167 660 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 CAMK2BQ13554 666 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 NIPAL3Q6P499 406 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 CD200R1LQ6Q8B3 271 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 ZAR1Q86SH2 424 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 GPALPP1Q8IXQ4 340 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 FAM71CQ8NEG0 241 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 OR14A16Q8NHC5 309 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 DAZLQ92904 295 aaKnown RBP12.51□□□□□ -0.41
SMG6-203ENST00000536871 SENP5Q96HI0 755 aaPredicted RBP12.51□□□□□ -0.41
SMG6-203ENST00000536871 C12orf10Q9HB07 376 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 ERVK13-1Q9NX77 482 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 FLRT3Q9NZU0 649 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 SRPK3Q9UPE1 567 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 CLCA3PQ9Y6N3 262 aa12.51□□□□□ -0.41
SMG6-203ENST00000536871 C5orf42Q9H799 3197 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 LAMA3Q16787 3333 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 IGKV3D-11A0A0A0MRZ8 115 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 OR6C76A6NM76 312 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 IDH3BO43837 385 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 SDC3O75056 442 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 NDUFB2O95178 105 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 IL9P15248 144 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 CFL1P23528 166 aaKnown RBP12.5□□□□□ -0.41
SMG6-203ENST00000536871 SLC6A8P48029 635 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 RNF144AP50876 292 aaPredicted RBP12.5□□□□□ -0.41
SMG6-203ENST00000536871 DEFA1P59665 94 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 DEFA3P59666 94 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 PLAURQ03405 335 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 SQSTM1Q13501 440 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 TRAM1Q15629 374 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 KLHL26Q53HC5 615 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 AGAP7PQ5VUJ5 663 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 WBP2NLQ6ICG8 309 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 PLEKHG7Q6ZR37 379 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 TTLL10Q6ZVT0 673 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 MEX3DQ86XN8 651 aaKnown RBP12.5□□□□□ -0.41
SMG6-203ENST00000536871 TMEM151BQ8IW70 566 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 ZNF485Q8NCK3 441 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 LSM14AQ8ND56 463 aaKnown RBP12.5□□□□□ -0.41
SMG6-203ENST00000536871 GRHL3Q8TE85 626 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 SLC25A46Q96AG3 418 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 SGTBQ96EQ0 304 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 MRPL48Q96GC5 212 aaKnown RBP12.5□□□□□ -0.41
SMG6-203ENST00000536871 WDFY2Q96P53 400 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 SECISBP2Q96T21 854 aaKnown RBP12.5□□□□□ -0.41
SMG6-203ENST00000536871 ZNF304Q9HCX3 659 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 MEPEQ9NQ76 525 aaPredicted RBP12.5□□□□□ -0.41
SMG6-203ENST00000536871 C20orf141Q9NUB4 165 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 UCKL1Q9NWZ5 548 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 TXNL4BQ9NX01 149 aaKnown RBP12.5□□□□□ -0.41
SMG6-203ENST00000536871 QPCTLQ9NXS2 382 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 SUSD2Q9UGT4 822 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 POLHQ9Y253 713 aa12.5□□□□□ -0.41
SMG6-203ENST00000536871 GOLGA4Q13439 2230 aaKnown RBP12.49□□□□□ -0.41
SMG6-203ENST00000536871 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.49□□□□□ -0.41
SMG6-203ENST00000536871 A0A1B0GX78 115 aa12.49□□□□□ -0.41
SMG6-203ENST00000536871 J3QRE1 110 aa12.49□□□□□ -0.41
SMG6-203ENST00000536871 K7ESF4 209 aa12.49□□□□□ -0.41
SMG6-203ENST00000536871 SCDO00767 359 aa12.49□□□□□ -0.41
SMG6-203ENST00000536871 FBLP22087 321 aaKnown RBP12.49□□□□□ -0.41
SMG6-203ENST00000536871 SLC37A1P57057 533 aa12.49□□□□□ -0.41
SMG6-203ENST00000536871 OR1D5P58170 312 aa12.49□□□□□ -0.41
SMG6-203ENST00000536871 PRPS1P60891 318 aa12.49□□□□□ -0.41
SMG6-203ENST00000536871 LGALS3BPQ08380 585 aa12.49□□□□□ -0.41
SMG6-203ENST00000536871 ATP1A4Q13733 1029 aa12.49□□□□□ -0.41
SMG6-203ENST00000536871 ERV3-1Q14264 604 aa12.49□□□□□ -0.41
SMG6-203ENST00000536871 LCN1P1Q5VSP4 162 aa12.49□□□□□ -0.41
SMG6-203ENST00000536871 PLBD1Q6P4A8 553 aa12.49□□□□□ -0.41
SMG6-203ENST00000536871 CCDC190Q86UF4 302 aa12.49□□□□□ -0.41
SMG6-203ENST00000536871 OR4N2Q8NGD1 307 aa12.49□□□□□ -0.41
SMG6-203ENST00000536871 PTPMT1Q8WUK0 201 aaPredicted RBP12.49□□□□□ -0.41
SMG6-203ENST00000536871 C1GALT1C1Q96EU7 318 aa12.49□□□□□ -0.41
SMG6-203ENST00000536871 LCORQ96JN0 433 aaPredicted RBP12.49□□□□□ -0.41
SMG6-203ENST00000536871 ELF4Q99607 663 aaPredicted RBP12.49□□□□□ -0.41
SMG6-203ENST00000536871 DPYSL5Q9BPU6 564 aa12.49□□□□□ -0.41
SMG6-203ENST00000536871 SLC30A2Q9BRI3 323 aa12.49□□□□□ -0.41
SMG6-203ENST00000536871 KCNN2Q9H2S1 579 aa12.49□□□□□ -0.41
SMG6-203ENST00000536871 CPNE5Q9HCH3 593 aa12.49□□□□□ -0.41
SMG6-203ENST00000536871 ATP13A2Q9NQ11 1180 aa12.49□□□□□ -0.41
SMG6-203ENST00000536871 TRAPPC4Q9Y296 219 aa12.49□□□□□ -0.41
SMG6-203ENST00000536871 SIT1Q9Y3P8 196 aa12.49□□□□□ -0.41
SMG6-203ENST00000536871 SLC35F4A4IF30 521 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 YKT6O15498 198 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 ALAS2P22557 587 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 NOS3P29474 1203 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 FXYD6P3P58550 94 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 CRYZQ08257 329 aaKnown RBP12.48□□□□□ -0.41
SMG6-203ENST00000536871 NKAIN2Q5VXU1 208 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 PAQR6Q6TCH4 344 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 SLC35F3Q8IY50 421 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 C17orf47Q8NEP4 570 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 OR13C2Q8NGS9 318 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 LIPHQ8WWY8 451 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 GATAD2BQ8WXI9 593 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 TMEM43Q9BTV4 400 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 ZNF768Q9H5H4 540 aaKnown RBP12.48□□□□□ -0.41
SMG6-203ENST00000536871 SMURF1Q9HCE7 757 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms