RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 PGCP20142 388 aa16.08■□□□□ 0.16
DDX55-204ENST00000536079 CEACAM8P31997 349 aaPredicted RBP16.08■□□□□ 0.16
DDX55-204ENST00000536079 PCGF2P35227 344 aa16.08■□□□□ 0.16
DDX55-204ENST00000536079 SFTPDP35247 375 aa16.08■□□□□ 0.16
DDX55-204ENST00000536079 PTGER4P35408 488 aa16.08■□□□□ 0.16
DDX55-204ENST00000536079 EIF1P41567 113 aaKnown RBP16.08■□□□□ 0.16
DDX55-204ENST00000536079 DLX5P56178 289 aa16.08■□□□□ 0.16
DDX55-204ENST00000536079 RAC1P63000 192 aa16.08■□□□□ 0.16
DDX55-204ENST00000536079 RNF220Q5VTB9 566 aa16.08■□□□□ 0.16
DDX55-204ENST00000536079 MTFR2Q6P444 385 aa16.08■□□□□ 0.16
DDX55-204ENST00000536079 POMZP3Q6PJE2 187 aa16.08■□□□□ 0.16
DDX55-204ENST00000536079 PLEKHM3Q6ZWE6 761 aa16.08■□□□□ 0.16
DDX55-204ENST00000536079 SLC15A3Q8IY34 581 aa16.08■□□□□ 0.16
DDX55-204ENST00000536079 LILRA2Q8N149 483 aa16.08■□□□□ 0.16
DDX55-204ENST00000536079 ZNF808Q8N4W9 903 aaPredicted RBP16.08■□□□□ 0.16
DDX55-204ENST00000536079 ANKS4BQ8N8V4 417 aa16.08■□□□□ 0.16
DDX55-204ENST00000536079 C11orf65Q8NCR3 313 aa16.08■□□□□ 0.16
DDX55-204ENST00000536079 OR10Q1Q8NGQ4 319 aa16.08■□□□□ 0.16
DDX55-204ENST00000536079 RND1Q92730 232 aa16.08■□□□□ 0.16
DDX55-204ENST00000536079 MRGPRX4Q96LA9 322 aa16.08■□□□□ 0.16
DDX55-204ENST00000536079 UCK2Q9BZX2 261 aa16.08■□□□□ 0.16
DDX55-204ENST00000536079 CALHM2Q9HA72 323 aa16.08■□□□□ 0.16
DDX55-204ENST00000536079 IFT52Q9Y366 437 aa16.08■□□□□ 0.16
DDX55-204ENST00000536079 PCNX1Q96RV3 2341 aa16.08■□□□□ 0.16
DDX55-204ENST00000536079 USP9YO00507 2555 aaPredicted RBP16.07■□□□□ 0.16
DDX55-204ENST00000536079 MBD3L4A6NDZ8 208 aaPredicted RBP16.07■□□□□ 0.16
DDX55-204ENST00000536079 MBD3L3A6NE82 208 aaPredicted RBP16.07■□□□□ 0.16
DDX55-204ENST00000536079 CFAP73A6NFT4 308 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 MBD3L5A6NJ08 208 aaPredicted RBP16.07■□□□□ 0.16
DDX55-204ENST00000536079 EIF1AYO14602 144 aaKnown RBP16.07■□□□□ 0.16
DDX55-204ENST00000536079 TNFSF11O14788 317 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 MFN2O95140 757 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 COL8A1P27658 744 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 ADH6P28332 368 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 GRNP28799 593 aaKnown RBP16.07■□□□□ 0.16
DDX55-204ENST00000536079 PRDX6P30041 224 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 SLC6A8P48029 635 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 NUDT2P50583 147 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 SMSP52788 366 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 RBBP4Q09028 425 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 FOXF2Q12947 444 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 LARS2Q15031 903 aaKnown RBP16.07■□□□□ 0.16
DDX55-204ENST00000536079 VMACQ2NL98 169 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 RIPPLY2Q5TAB7 128 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 GRAMD2AQ8IUY3 354 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 EID3Q8N140 333 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 MEIOBQ8N635 442 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 FITM2Q8N6M3 262 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 SMYD1Q8NB12 490 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 GPR32P1Q8NGA4 272 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 MBD3L2Q8NHZ7 208 aaPredicted RBP16.07■□□□□ 0.16
DDX55-204ENST00000536079 ZNF563Q8TA94 476 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 ST8SIA1Q92185 356 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 UCN2Q96RP3 112 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 ECSITQ9BQ95 431 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 PRR14Q9BWN1 585 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 PINK1Q9BXM7 581 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 CTPS2Q9NRF8 586 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 ZNF232Q9UNY5 417 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 ANGPT4Q9Y264 503 aa16.07■□□□□ 0.16
DDX55-204ENST00000536079 PHF3Q92576 2039 aaKnown RBP16.07■□□□□ 0.16
DDX55-204ENST00000536079 M0QX08 132 aa16.06■□□□□ 0.16
DDX55-204ENST00000536079 NME4O00746 187 aa16.06■□□□□ 0.16
DDX55-204ENST00000536079 ADAMDEC1O15204 470 aa16.06■□□□□ 0.16
DDX55-204ENST00000536079 PRKAR1BP31321 381 aa16.06■□□□□ 0.16
DDX55-204ENST00000536079 AGFG1P52594 562 aaKnown RBP16.06■□□□□ 0.16
DDX55-204ENST00000536079 ZNF136P52737 540 aa16.06■□□□□ 0.16
DDX55-204ENST00000536079 MERTKQ12866 999 aa16.06■□□□□ 0.16
DDX55-204ENST00000536079 TMEM176BQ3YBM2 270 aaPredicted RBP16.06■□□□□ 0.16
DDX55-204ENST00000536079 DHRS4L2Q6PKH6 230 aa16.06■□□□□ 0.16
DDX55-204ENST00000536079 XKRXQ6PP77 449 aa16.06■□□□□ 0.16
DDX55-204ENST00000536079 ADGRG3Q86Y34 549 aa16.06■□□□□ 0.16
DDX55-204ENST00000536079 LACC1Q8IV20 430 aa16.06■□□□□ 0.16
DDX55-204ENST00000536079 OR10D3Q8NH80 312 aa16.06■□□□□ 0.16
DDX55-204ENST00000536079 TAMM41Q96BW9 452 aa16.06■□□□□ 0.16
DDX55-204ENST00000536079 CMTM5Q96DZ9 223 aa16.06■□□□□ 0.16
DDX55-204ENST00000536079 DNAJA3Q96EY1 480 aa16.06■□□□□ 0.16
DDX55-204ENST00000536079 LRRC37BQ96QE4 947 aa16.06■□□□□ 0.16
DDX55-204ENST00000536079 SH3GL1Q99961 368 aa16.06■□□□□ 0.16
DDX55-204ENST00000536079 SRXN1Q9BYN0 137 aa16.06■□□□□ 0.16
DDX55-204ENST00000536079 COQ10BQ9H8M1 238 aa16.06■□□□□ 0.16
DDX55-204ENST00000536079 EFCAB1Q9HAE3 211 aa16.06■□□□□ 0.16
DDX55-204ENST00000536079 A0A1W2PNR3 127 aa16.05■□□□□ 0.16
DDX55-204ENST00000536079 NKX2-6A6NCS4 301 aa16.05■□□□□ 0.16
DDX55-204ENST00000536079 C19orf84I3L1E1 186 aa16.05■□□□□ 0.16
DDX55-204ENST00000536079 CXCL13O43927 109 aa16.05■□□□□ 0.16
DDX55-204ENST00000536079 TPST2O60704 377 aa16.05■□□□□ 0.16
DDX55-204ENST00000536079 AQP8O94778 261 aa16.05■□□□□ 0.16
DDX55-204ENST00000536079 GP1BBP13224 206 aa16.05■□□□□ 0.16
DDX55-204ENST00000536079 KLK2P20151 261 aa16.05■□□□□ 0.16
DDX55-204ENST00000536079 CCNA2P20248 432 aa16.05■□□□□ 0.16
DDX55-204ENST00000536079 CD247P20963 164 aa16.05■□□□□ 0.16
DDX55-204ENST00000536079 ELK4P28324 431 aa16.05■□□□□ 0.16
DDX55-204ENST00000536079 TIMP3P35625 211 aa16.05■□□□□ 0.16
DDX55-204ENST00000536079 EIF1AXP47813 144 aaKnown RBP16.05■□□□□ 0.16
DDX55-204ENST00000536079 SLC7A2P52569 658 aa16.05■□□□□ 0.16
DDX55-204ENST00000536079 PON3Q15166 354 aa16.05■□□□□ 0.16
DDX55-204ENST00000536079 DUSP7Q16829 419 aa16.05■□□□□ 0.16
DDX55-204ENST00000536079 FAM91A1Q658Y4 838 aa16.05■□□□□ 0.16
DDX55-204ENST00000536079 HACD2Q6Y1H2 254 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms