RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 SLC37A2Q8TED4 501 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 NDC1Q9BTX1 674 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 RBCK1Q9BYM8 510 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 CLEC1BQ9P126 229 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 PCDHGB7Q9Y5F8 929 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 A0A0C4DFX4 3053 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 CHP2O43745 196 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 SCO2O43819 266 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 SLC19A2O60779 497 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 NKX2-2O95096 273 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 CBX7O95931 251 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 HLA-DQB1P01920 261 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 MT-ND5P03915 603 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 CELA2BP08218 269 aaPredicted RBP12.15□□□□□ -0.46
LDLR-203ENST00000535915 TRAPPC2P0DI81 140 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 TRAPPC2BP0DI82 140 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 PRKAR1AP10644 381 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 ZNF3P17036 446 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 MTNR1BP49286 362 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 CTBP2P56545 445 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 CSTF1Q05048 431 aaKnown RBP12.15□□□□□ -0.46
LDLR-203ENST00000535915 CRMP1Q14194 572 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 OAFQ86UD1 273 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 SLC22A18ASQ8N1D0 253 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 OR9A4Q8NGU2 314 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 SLC7A6Q92536 515 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 PMM1Q92871 262 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 S1PR5Q9H228 398 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 SLC28A3Q9HAS3 691 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 FLRT3Q9NZU0 649 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 FBXL21Q9UKT6 434 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 SLC35A3Q9Y2D2 325 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 TRIOO75962 3097 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 A0A0B4J293 547 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 A0A0B4J2E0 115 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 A0A1B0GWA3 101 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 A0A1B0GX12 115 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 ICMTO60725 284 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 ALX3O95076 343 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 GYPBP06028 91 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 TYRP1P17643 537 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 ELK1P19419 428 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 DRD1P21728 446 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 PTBP1P26599 531 aaKnown RBP eCLIP12.15□□□□□ -0.462e-11■□□□□ 9.4
LDLR-203ENST00000535915 EMDP50402 254 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 RAB38P57729 211 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 GNG2P59768 71 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 UBE2IP63279 158 aaKnown RBP12.15□□□□□ -0.46
LDLR-203ENST00000535915 MRPS21P82921 87 aaKnown RBP12.15□□□□□ -0.46
LDLR-203ENST00000535915 SLC3A1Q07837 685 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 PRR23CQ6ZRP0 262 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 GLCCI1Q86VQ1 547 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 NR2C2APQ86WQ0 139 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 OOSP2Q86WS3 158 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 SPERTQ8NA61 448 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 GPBAR1Q8TDU6 330 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 SMAP2Q8WU79 429 aaPredicted RBP12.15□□□□□ -0.46
LDLR-203ENST00000535915 ACOT12Q8WYK0 555 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 RNF31Q96EP0 1072 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 SNX18Q96RF0 628 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 TNFRSF13CQ96RJ3 184 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 GSDMCQ9BYG8 508 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 POLE3Q9NRF9 147 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 INPP5EQ9NRR6 644 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 RBFOX1Q9NWB1 397 aaKnown RBP12.15□□□□□ -0.46
LDLR-203ENST00000535915 FBXL4Q9UKA2 621 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 HEATR5AQ86XA9 2040 aa12.15□□□□□ -0.46
LDLR-203ENST00000535915 FAM221BA6H8Z2 402 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 ZSCAN5BA6NJL1 495 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 E9PI62 339 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 J3QLW9 94 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 SEMA4FO95754 770 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 SBK2P0C263 348 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 SLC35E2P0CK97 266 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 IL9P15248 144 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 ZNF19P17023 458 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 F8A1P23610 371 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 SHC1P29353 583 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 HTR4Q13639 388 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 ZNHIT3Q15649 155 aaPredicted RBP12.14□□□□□ -0.47
LDLR-203ENST00000535915 TAF8Q7Z7C8 310 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 C4orf36Q96KX1 117 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 TMEM43Q9BTV4 400 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 BEX2Q9BXY8 128 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 PPIL3Q9H2H8 161 aaKnown RBP12.14□□□□□ -0.47
LDLR-203ENST00000535915 RANGRFQ9HD47 186 aaPredicted RBP12.14□□□□□ -0.47
LDLR-203ENST00000535915 FAM60AQ9NP50 221 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 EXTL2Q9UBQ6 330 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 GON4LQ3T8J9 2241 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 LOC105371267A0A1B0GV96 52 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 FAM240BA0A1B0GVZ2 78 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 LYRM1O43325 122 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 ADAM11O75078 769 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 PTP4A3O75365 173 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 CTSBP07858 339 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 HK1P19367 917 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 PSG6Q00889 435 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 ADAM15Q13444 863 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 ALG10BQ5I7T1 473 aa12.14□□□□□ -0.47
LDLR-203ENST00000535915 FAM27D1Q5T7N8 215 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms