RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 HCAR1Q9BXC0 346 aa12.33□□□□□ -0.44
VPS33B-202ENST00000535906 MAU2Q9Y6X3 613 aa12.33□□□□□ -0.44
VPS33B-202ENST00000535906 TLCD2A6NGC4 264 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 LMO7DNF2Z398 122 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 SEC14L5O43304 696 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 PRAMEF2O60811 474 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 HOXD12P35452 270 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 ATP6V1E1P36543 226 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 CTBP2P56545 445 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 ACSM1Q08AH1 577 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 OR51G2Q8NGK0 314 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 OR51A7Q8NH64 312 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 KIAA1143Q96AT1 154 aaPredicted RBP12.32□□□□□ -0.44
VPS33B-202ENST00000535906 COQ7Q99807 217 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 OR10A5Q9H207 317 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 PDE7BQ9NP56 450 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 LRIT1Q9P2V4 623 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 BLACEA4D250 179 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 NPIPB9F8W1W9 429 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 HYAL3O43820 417 aaPredicted RBP12.32□□□□□ -0.44
VPS33B-202ENST00000535906 PRKNO60260 465 aaPredicted RBP12.32□□□□□ -0.44
VPS33B-202ENST00000535906 RCBTB2O95199 551 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 IFNA16P05015 189 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 GUSBP08236 651 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 GAAP10253 952 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 CD1CP29017 333 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 CSNK1EP49674 416 aaKnown RBP12.32□□□□□ -0.44
VPS33B-202ENST00000535906 HNRNPKP61978 463 aaKnown RBP eCLIP12.32□□□□□ -0.44
VPS33B-202ENST00000535906 FOXK2Q01167 660 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 FUT7Q11130 342 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 ASAH1Q13510 395 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 ZNF141Q15928 474 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 NDUFAF6Q330K2 333 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 ZNF791Q3KP31 576 aaPredicted RBP12.32□□□□□ -0.44
VPS33B-202ENST00000535906 ALG10BQ5I7T1 473 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 RSBN1Q5VWQ0 802 aaPredicted RBP12.32□□□□□ -0.44
VPS33B-202ENST00000535906 OGFOD3Q6PK18 319 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 RAB43Q86YS6 212 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 ARIH2OSQ8N7S6 290 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 OR6F1Q8NGZ6 308 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 OR4C3Q8NH37 302 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 C1orf216Q8TAB5 229 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 PTP4A1Q93096 173 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 SLC35B4Q969S0 331 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 ZNF426Q9BUY5 554 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 IFT27Q9BW83 186 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 Q9N2J8 555 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 TNFRSF10DQ9UBN6 386 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 TMEM5Q9Y2B1 443 aa12.32□□□□□ -0.44
VPS33B-202ENST00000535906 TRIOBPQ9H2D6 2365 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 HEATR5AQ86XA9 2040 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 A8MU76 341 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 J3QRE1 110 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 ZNF749O43361 778 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 AKAP8O43823 692 aaKnown RBP12.31□□□□□ -0.44
VPS33B-202ENST00000535906 PTP4A3O75365 173 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 CSF3P09919 207 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 HSD17B7P56937 341 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 NXPH1P58417 271 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 FGFBP1Q14512 234 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 ZNF362Q5T0B9 420 aaPredicted RBP12.31□□□□□ -0.44
VPS33B-202ENST00000535906 FCRLBQ6BAA4 426 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 NIPAL3Q6P499 406 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 KLHL36Q8N4N3 616 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 LSMEM1Q8N8F7 131 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 ZNF615Q8N8J6 731 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 PSD4Q8NDX1 1056 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 OR52N1Q8NH53 320 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 ADAMTS18Q8TE60 1221 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 JAM3Q9BX67 310 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 SEC16AO15027 2179 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 A0A0C4DFX4 3053 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 ASXL3Q9C0F0 2248 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 CEP192Q8TEP8 1941 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 POLR1CO15160 346 aaPredicted RBP12.31□□□□□ -0.44
VPS33B-202ENST00000535906 TMCC2O75069 709 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 CLPSP04118 112 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 HLA-DPB1P04440 258 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 NKX2-5P52952 324 aaPredicted RBP12.31□□□□□ -0.44
VPS33B-202ENST00000535906 ATP12AP54707 1039 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 CSTF1Q05048 431 aaKnown RBP12.31□□□□□ -0.44
VPS33B-202ENST00000535906 FHL1Q13642 323 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 TAB1Q15750 504 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 C14orf28Q4W4Y0 310 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 TCTE1Q5JU00 501 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 PRPF38BQ5VTL8 546 aaKnown RBP12.31□□□□□ -0.44
VPS33B-202ENST00000535906 MEPCEQ7L2J0 689 aaKnown RBP12.31□□□□□ -0.44
VPS33B-202ENST00000535906 GID4Q8IVV7 300 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 CADM2Q8N3J6 435 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 CAMKK1Q8N5S9 505 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 BCORP1Q8N888 145 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 SPRYD4Q8WW59 207 aaPredicted RBP12.31□□□□□ -0.44
VPS33B-202ENST00000535906 LMF1Q96S06 567 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 DCLRE1CQ96SD1 692 aaKnown RBP12.31□□□□□ -0.44
VPS33B-202ENST00000535906 TRIM2Q9C040 744 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 SLC22A4Q9H015 551 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 FN3KQ9H479 309 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 NEK6Q9HC98 313 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 CMC2Q9NRP2 79 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms