RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 ULK2Q8IYT8 1036 aa10.89□□□□□ -0.67
CHD4-203ENST00000535717 RNF148Q8N7C7 305 aa10.89□□□□□ -0.67
CHD4-203ENST00000535717 GPR32P1Q8NGA4 272 aa10.89□□□□□ -0.67
CHD4-203ENST00000535717 ZNF563Q8TA94 476 aa10.89□□□□□ -0.67
CHD4-203ENST00000535717 ST8SIA1Q92185 356 aa10.89□□□□□ -0.67
CHD4-203ENST00000535717 SLC35B4Q969S0 331 aa10.89□□□□□ -0.67
CHD4-203ENST00000535717 RELTQ969Z4 430 aa10.89□□□□□ -0.67
CHD4-203ENST00000535717 MRGPRX4Q96LA9 322 aa10.89□□□□□ -0.67
CHD4-203ENST00000535717 CDRT15Q96T59 188 aa10.89□□□□□ -0.67
CHD4-203ENST00000535717 KCTD14Q9BQ13 255 aaPredicted RBP10.89□□□□□ -0.67
CHD4-203ENST00000535717 WFDC6Q9BQY6 131 aa10.89□□□□□ -0.67
CHD4-203ENST00000535717 PINK1Q9BXM7 581 aa10.89□□□□□ -0.67
CHD4-203ENST00000535717 ACER3Q9NUN7 267 aa10.89□□□□□ -0.67
CHD4-203ENST00000535717 CAMK2AQ9UQM7 478 aa10.89□□□□□ -0.67
CHD4-203ENST00000535717 TMEM229AB2RXF0 380 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 H0YC42 278 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 H3BML4 177 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 CXCR6O00574 342 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 GSTA4O15217 222 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 LGI1O95970 557 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 PEPDP12955 493 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 GP1BBP13224 206 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 ADH6P28332 368 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 KDELR2P33947 212 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 KCNJ5P48544 419 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 ZNF136P52737 540 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 TPD52P55327 224 aaPredicted RBP10.88□□□□□ -0.67
CHD4-203ENST00000535717 DLX5P56178 289 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 CLDN15P56746 228 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 CLDN20P56880 219 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 SRYQ05066 204 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 BCL2A1Q16548 175 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 C4orf17Q53FE4 359 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 SAMD4BQ5PRF9 694 aaKnown RBP10.88□□□□□ -0.67
CHD4-203ENST00000535717 RTL6Q6ICC9 239 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 PLEKHM3Q6ZWE6 761 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 ZNF550Q7Z398 422 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 FAM156AQ8NDB6 213 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 BHLHE22Q8NFJ8 381 aaPredicted RBP10.88□□□□□ -0.67
CHD4-203ENST00000535717 SLC26A7Q8TE54 656 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 TMEM234Q8WY98 164 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 TP63Q9H3D4 680 aaPredicted RBP10.88□□□□□ -0.67
CHD4-203ENST00000535717 ALKBH4Q9NXW9 302 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 TAS2R1Q9NYW7 299 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 CD300AQ9UGN4 299 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 AP4B1Q9Y6B7 739 aa10.88□□□□□ -0.67
CHD4-203ENST00000535717 A0A1B0GUH1 482 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 FIGNL2A6NMB9 653 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 AHRRA9YTQ3 701 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 SYT5O00445 386 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 CCL21O00585 134 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 WDR1O75083 606 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 SEMA7AO75326 666 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 OPN1LWP04000 364 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 FESP07332 822 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 C8BP07358 591 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 HSD17B1P14061 328 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 UQCRBP14927 111 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 NCK1P16333 377 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 GGT1P19440 569 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 TCN1P20061 433 aaPredicted RBP10.87□□□□□ -0.67
CHD4-203ENST00000535717 ACVR2AP27037 513 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 ELK4P28324 431 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 HTR1EP28566 365 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 SHC1P29353 583 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 MSX2P35548 267 aaPredicted RBP10.87□□□□□ -0.67
CHD4-203ENST00000535717 SLC1A3P43003 542 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 SUCLG1P53597 346 aaKnown RBP10.87□□□□□ -0.67
CHD4-203ENST00000535717 RAC1P63000 192 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 KCNC4Q03721 635 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 SRSF1Q07955 248 aaKnown RBP eCLIP10.87□□□□□ -0.67
CHD4-203ENST00000535717 MERTKQ12866 999 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 CEACAM7Q14002 265 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 NRF1Q16656 503 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 LRRC23Q53EV4 343 aaPredicted RBP10.87□□□□□ -0.67
CHD4-203ENST00000535717 CYBRD1Q53TN4 286 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 C6orf89Q6UWU4 347 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 GRINAQ7Z429 371 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 GGNQ86UU5 652 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 FJX1Q86VR8 437 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 LSRQ86X29 649 aaPredicted RBP10.87□□□□□ -0.67
CHD4-203ENST00000535717 PM20D2Q8IYS1 436 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 UBQLNLQ8IYU4 475 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 LILRA2Q8N149 483 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 RPRMLQ8N4K4 120 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 TNIP2Q8NFZ5 429 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 SMPDL3BQ92485 455 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 FIG4Q92562 907 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 ARHGDIGQ99819 225 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 TUBA1CQ9BQE3 449 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 PRR14Q9BWN1 585 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 TMEM185BQ9H7F4 350 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 CTPS2Q9NRF8 586 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 KLHL28Q9NXS3 571 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 EGFL7Q9UHF1 273 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 SLC13A4Q9UKG4 626 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 MEMO1Q9Y316 297 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 FAM215AQ9Y5M1 114 aa10.87□□□□□ -0.67
CHD4-203ENST00000535717 UTP20O75691 2785 aaKnown RBP10.87□□□□□ -0.67
CHD4-203ENST00000535717 MYO7BQ6PIF6 2116 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms