RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 PIGXQ8TBF5 258 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 APH1AQ96BI3 265 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 ARSGQ96EG1 525 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 ZBTB18Q99592 522 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 SRXN1Q9BYN0 137 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 CENPHQ9H3R5 247 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 BCO1Q9HAY6 547 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 ZNF701Q9NV72 531 aaPredicted RBP11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 GPATCH2Q9NW75 528 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 SLC17A7Q9P2U7 560 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 NOSIPQ9Y314 301 aaKnown RBP11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 WDR45Q9Y484 360 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 IGHV3-15A0A0B4J1V0 119 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 A0A1W2PNR3 127 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 FAM234BA2RU67 622 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 WDR91A4D1P6 747 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 TMEM247A6NEH6 219 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 ZNF724A8MTY0 619 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 CPSF4O95639 269 aaKnown RBP11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 UQCRC2P22695 453 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 MAGEA8P43361 318 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 OR3A2P47893 321 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 HBA1P69905 142 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 TXNL4AP83876 142 aaKnown RBP11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 TGFBR3Q03167 851 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 LRRC74AQ0VAA2 488 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 FAPQ12884 760 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 ARHGAP11BQ3KRB8 267 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 UGT3A2Q3SY77 523 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 KRT71Q3SY84 523 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 SYT14P1Q58G82 188 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 TIMM23BQ5SRD1 257 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 KLHL24Q6TFL4 600 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 NUFIP2Q7Z417 695 aaKnown RBP11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 CROCCP2Q86T23 111 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 PIAS4Q8N2W9 510 aaPredicted RBP11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 ARFGAP2Q8N6H7 521 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 XAGE5Q8WWM1 108 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 DDIT4LQ96D03 193 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 MARK4Q96L34 752 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 PPP1R36Q96LQ0 422 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 SDF2Q99470 211 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 NAA11Q9BSU3 229 aaPredicted RBP11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 PARPBPQ9NWS1 579 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 UPB1Q9UBR1 384 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 GIMAP2Q9UG22 337 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 LGALS13Q9UHV8 139 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 MKLN1Q9UL63 735 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 LIPT1Q9Y234 373 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 FLNAP21333 2647 aaKnown RBP11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 ABCA2Q9BZC7 2435 aa11.77□□□□□ -0.53
CLSTN3-205ENST00000535452 NF1P21359 2839 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 PRSS51A0A1B0GVH4 220 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 CYTIPO60759 359 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 MRPL33O75394 65 aaKnown RBP11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 LYZL6O75951 148 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 SERPINE1P05121 402 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 RYKP34925 604 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 CLK1P49759 484 aaKnown RBP11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 DIO1P49895 249 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 CDH11P55287 796 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 RPS26P62854 115 aaKnown RBP11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 BSPH1Q075Z2 132 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 ZNF141Q15928 474 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 ZNF672Q499Z4 452 aaPredicted RBP11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 SLC25A53Q5H9E4 307 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 OR4F3Q6IEY1 312 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 OR7E24Q6IFN5 339 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 SLC22A25Q6T423 547 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 TMPPEQ6ZT21 453 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 GRINAQ7Z429 371 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 MTDHQ86UE4 582 aaKnown RBP11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 CIARTQ8N365 385 aaPredicted RBP11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 PIWIL2Q8TC59 973 aaKnown RBP11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 KCNS3Q9BQ31 491 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 PSD2Q9BQI7 771 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 RHNO1Q9BSD3 238 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 TMEM204Q9BSN7 226 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 OR51I1Q9H343 314 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 ARMC7Q9H6L4 198 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 ACER3Q9NUN7 267 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 ASB6Q9NWX5 421 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 ASIC5Q9NY37 505 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 CISD1Q9NZ45 108 aaKnown RBP11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 MARCOQ9UEW3 520 aaPredicted RBP11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 ZDHHC2Q9UIJ5 367 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 HDGFL3Q9Y3E1 203 aa11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 MAGED1Q9Y5V3 778 aaPredicted RBP11.76□□□□□ -0.53
CLSTN3-205ENST00000535452 ZFHX3Q15911 3703 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 INAFM1C9JVW0 142 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 BIRC5O15392 142 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 DNPH1O43598 174 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 EIF1BO60739 113 aaKnown RBP11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 GCM2O75603 506 aaPredicted RBP11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 KRT33AO76009 404 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 PLAUP00749 431 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 DHRS4L1P0CG22 281 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 LBPP18428 481 aa11.75□□□□□ -0.53
CLSTN3-205ENST00000535452 PTAFRP25105 342 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms