RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 METTL11BQ5VVY1 283 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 RTL6Q6ICC9 239 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 VRK2Q86Y07 508 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 C3orf58Q8NDZ4 430 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 RSPRY1Q96DX4 576 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 HIPK2Q9H2X6 1198 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 ADAMTS5Q9UNA0 930 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 FOXD2O60548 495 aaPredicted RBP17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 SERPINA2P20848 420 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 AHRP35869 848 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 RAB40BQ12829 278 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 SCGB2A2Q13296 93 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 CDK5R2Q13319 367 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 ACSM3Q53FZ2 586 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 EXOSC6Q5RKV6 272 aaKnown RBP17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 ZNF322Q6U7Q0 402 aaPredicted RBP17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 GDPGP1Q6ZNW5 385 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 MFSD9Q8NBP5 474 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 OR11L1Q8NGX0 322 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 DNMT3BQ9UBC3 853 aaKnown RBP17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 OR14J1Q9UGF5 321 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 TMEM269A0A1B0GVZ9 245 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 VASNQ6EMK4 673 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 CNIH2Q6PI25 160 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 SLC16A14Q7RTX9 510 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 OR1J4Q8NGS1 313 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 FOXN4Q96NZ1 517 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 SLC6A20Q9NP91 592 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 KDM4EB2RXH2 506 aaPredicted RBP17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 CAPNS1P04632 268 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 BMP1P13497 986 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 IL2RGP31785 369 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 ZNF595Q8IYB9 648 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 INSM2Q96T92 566 aaPredicted RBP17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 NUDT22Q9BRQ3 303 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 VN1R3Q9BXE9 311 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 MRPS14O60783 128 aaKnown RBP17■□□□□ 0.31
SFSWAP-203ENST00000535236 MAOAP21397 527 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 AOAHP28039 575 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 ANKRD54Q6NXT1 300 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 FAM160A2Q8N612 972 aaPredicted RBP17■□□□□ 0.31
SFSWAP-203ENST00000535236 STEAP2Q8NFT2 490 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 TAAR8Q969N4 342 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 SLC22A7Q9Y694 548 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 A0A0U1RQK1 487 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 H0YGG7 62 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 TP53P04637 393 aaPredicted RBP17■□□□□ 0.31
SFSWAP-203ENST00000535236 GYPBP06028 91 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 MEF2DQ14814 521 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 C19orf47Q8N9M1 422 aaKnown RBP17■□□□□ 0.31
SFSWAP-203ENST00000535236 TOX2Q96NM4 488 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 OR14A2Q96R54 314 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 SNX18Q96RF0 628 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 HSFX1Q9UBD0 423 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 CACNG2Q9Y698 323 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 NUMBLQ9Y6R0 609 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 MEIS3P1A6NDR6 274 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 C1SP09871 688 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 RAB38P57729 211 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 MYLIPQ8WY64 445 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 C4orf36Q96KX1 117 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 PRRT1Q99946 306 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 BCL7BQ9BQE9 202 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 ASF1BQ9NVP2 202 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 VAPAQ9P0L0 249 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 TESQ9UGI8 421 aaKnown RBP17■□□□□ 0.31
SFSWAP-203ENST00000535236 LOC285095A0A1B0GVY8 99 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 CEBPZOSA8MTT3 80 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 PRDX3P30048 256 aaKnown RBP17■□□□□ 0.31
SFSWAP-203ENST00000535236 GPR18Q14330 331 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 VHLLQ6RSH7 139 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 GPR155Q7Z3F1 870 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 C17orf50Q8WW18 174 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 SERTAD4Q9NUC0 356 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 MED16Q9Y2X0 877 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 NUBP2Q9Y5Y2 271 aa17■□□□□ 0.31
SFSWAP-203ENST00000535236 UBFD1O14562 309 aaKnown RBP16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 MRPS10P82664 201 aaKnown RBP16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 OR7G2Q8NG99 324 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 OR5K2Q8NHB8 316 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 EDAQ92838 391 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 ZNF845Q96IR2 970 aaPredicted RBP16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 UBXN10Q96LJ8 280 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 WIF1Q9Y5W5 379 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 PAHP00439 452 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 TFP02787 698 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 SERPINA7P05543 415 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 HLA-FP30511 346 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 CSNK1EP49674 416 aaKnown RBP16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 SSR4P51571 173 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 NFATC3Q12968 1075 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 ZNF529Q6P280 563 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 KIF18BQ86Y91 864 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 SULF2Q8IWU5 870 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 LRRC18Q8N456 261 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 ATOH1Q92858 354 aaPredicted RBP16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 EGLN3Q9H6Z9 239 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 EMC9Q9Y3B6 208 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 KAT6AQ92794 2004 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 PKLRP30613 574 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms