RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 DCST2Q5T1A1 773 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 RSBN1Q5VWQ0 802 aaPredicted RBP11.3□□□□□ -0.6
SCARB1-204ENST00000535005 INO80CQ6PI98 192 aaPredicted RBP11.3□□□□□ -0.6
SCARB1-204ENST00000535005 SLC34A3Q8N130 599 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 OR4N2Q8NGD1 307 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 GRPEL2Q8TAA5 225 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 PMM1Q92871 262 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 THOC3Q96J01 351 aaKnown RBP11.3□□□□□ -0.6
SCARB1-204ENST00000535005 SAP130Q9H0E3 1048 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 PIF1Q9H611 641 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 CALML5Q9NZT1 146 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 MRTO4Q9UKD2 239 aaKnown RBP11.3□□□□□ -0.6
SCARB1-204ENST00000535005 TRAPPC4Q9Y296 219 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 YARS2Q9Y2Z4 477 aaKnown RBP11.3□□□□□ -0.6
SCARB1-204ENST00000535005 OR10H1Q9Y4A9 318 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 GMPPBQ9Y5P6 360 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 E9PQ18 207 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 XPNPEP2O43895 674 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 AIREO43918 545 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 CCNKO75909 580 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 IL33O95760 270 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 NR2F1P10589 423 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 FPR1P21462 350 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 NRG3P56975 720 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 CHRNEQ04844 493 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 SCARB2Q14108 478 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 SYPL1Q16563 259 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 DECR1Q16698 335 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.3□□□□□ -0.6
SCARB1-204ENST00000535005 DEFB109BQ30KR1 87 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 REEP3Q6NUK4 255 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 C16orf62Q7Z3J2 963 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 GALNT16Q8N428 558 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 BCORP1Q8N888 145 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 KDF1Q8NAX2 398 aaPredicted RBP11.3□□□□□ -0.6
SCARB1-204ENST00000535005 ZNF540Q8NDQ6 660 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 CNIH3Q8TBE1 160 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 SLC22A8Q8TCC7 542 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 BRIX1Q8TDN6 353 aaKnown RBP11.3□□□□□ -0.6
SCARB1-204ENST00000535005 THAP3Q8WTV1 239 aaPredicted RBP11.3□□□□□ -0.6
SCARB1-204ENST00000535005 MYDGFQ969H8 173 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 MAL2Q969L2 176 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 TMCO6Q96DC7 493 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 ZNF354BQ96LW1 612 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 DCBLD2Q96PD2 775 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 G6PC3Q9BUM1 346 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 ZNF350Q9GZX5 532 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 CDCP1Q9H5V8 836 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 RBMX2Q9Y388 322 aaKnown RBP11.3□□□□□ -0.6
SCARB1-204ENST00000535005 KCNMB2Q9Y691 235 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 ASPMQ8IZT6 3477 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 DMXL2Q8TDJ6 3036 aa11.3□□□□□ -0.6
SCARB1-204ENST00000535005 A0A0G2JPF8 293 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 HNRNPCL2B2RXH8 293 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 FAM25AB3EWG3 89 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 FAM25CB3EWG5 89 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 FAM25GB3EWG6 89 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 HNRNPCL3B7ZW38 293 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 WWP2O00308 870 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 TBX1O43435 398 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 SLC28A2O43868 658 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 TSPAN2O60636 221 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 ZNF354AO60765 605 aaPredicted RBP11.29□□□□□ -0.6
SCARB1-204ENST00000535005 STX11O75558 287 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 IGKV1D-16P01601 117 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 HNRNPCL4P0DMR1 293 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 ITGA3P26006 1051 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 ABCD3P28288 659 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 DNAJA1P31689 397 aaKnown RBP11.29□□□□□ -0.6
SCARB1-204ENST00000535005 SOX11P35716 441 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 DDOSTP39656 456 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 MAP2K4P45985 399 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 CRISP3P54108 245 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 PSMD4P55036 377 aaKnown RBP11.29□□□□□ -0.6
SCARB1-204ENST00000535005 PCBP3P57721 371 aaKnown RBP11.29□□□□□ -0.6
SCARB1-204ENST00000535005 NNATQ16517 81 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 DESI1Q6ICB0 168 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 LYPD8Q6UX82 237 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 C16orf47Q6ZP98 133 aaPredicted RBP11.29□□□□□ -0.6
SCARB1-204ENST00000535005 CCDC103Q8IW40 242 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 FAM86B1Q8N7N1 296 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 ASCC1Q8N9N2 400 aaKnown RBP11.29□□□□□ -0.6
SCARB1-204ENST00000535005 NFKBIDQ8NI38 313 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 ZCCHC14Q8WYQ9 949 aaKnown RBP11.29□□□□□ -0.6
SCARB1-204ENST00000535005 HTRA1Q92743 480 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 TMEM19Q96HH6 336 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 RASL10BQ96S79 203 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 SLC38A1Q9H2H9 487 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 TEKT2Q9UIF3 430 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 NPFFR2Q9Y5X5 522 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 DSPPQ9NZW4 1301 aa11.29□□□□□ -0.6
SCARB1-204ENST00000535005 C5orf58C9J3I9 102 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 ITGA10O75578 1167 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 CEACAM4O75871 244 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 OR2J2O76002 312 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 BCHEP06276 602 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 CHRM4P08173 479 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 FBXO45P0C2W1 286 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 RCVRNP35243 200 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 IST1P53990 364 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms