RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 TBC1D3EA0A087X179 549 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 TBC1D3KA0A087X1G2 549 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 OR6C68A6NDL8 312 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 TBC1D3FA6NER0 549 aaPredicted RBP8.41□□□□□ -1.06
SF3B2-216ENST00000534765 ANKDD1BA6NHY2 528 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 TBC1D3LB9A6J9 549 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 NME6O75414 186 aaPredicted RBP8.41□□□□□ -1.06
SF3B2-216ENST00000534765 TGFB1P01137 390 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 IGHV4-34P06331 123 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 TBC1D3HP0C7X1 549 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 C5AR1P21730 350 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 OR2B8PP59922 312 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 RPS13P62277 151 aaKnown RBP8.41□□□□□ -1.06
SF3B2-216ENST00000534765 VLDLRP98155 873 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 COTL1Q14019 142 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 TTLL9Q3SXZ7 439 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 TBC1D3GQ6DHY5 549 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 TBC1D3CQ6IPX1 549 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 NUDT13Q86X67 352 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 TBC1D3Q8IZP1 549 aaPredicted RBP8.41□□□□□ -1.06
SF3B2-216ENST00000534765 ARL6IP6Q8N6S5 226 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 BVESQ8NE79 360 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 BPIFCQ8NFQ6 507 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 OR2T4Q8NH00 348 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 HAVCR2Q8TDQ0 301 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 TNFAIP8L1Q8WVP5 186 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 PANX1Q96RD7 426 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 ORAI3Q9BRQ5 295 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 LRTM1Q9HBL6 345 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 C5AR2Q9P296 337 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 RPS6KA6Q9UK32 745 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 WASF3Q9UPY6 502 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 KLK4Q9Y5K2 254 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 TRBV5-3A0A0A0MS03 114 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 TCRBV21S2A2A0A5A6 115 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 TERTO14746 1132 aaKnown RBP8.41□□□□□ -1.06
SF3B2-216ENST00000534765 SUV39H1O43463 412 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 HCRTR1O43613 425 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 PRICKLE3O43900 615 aaPredicted RBP8.41□□□□□ -1.06
SF3B2-216ENST00000534765 SOX15O60248 233 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 IFNA4P05014 189 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 NME1P15531 152 aaKnown RBP8.41□□□□□ -1.06
SF3B2-216ENST00000534765 GABRB1P18505 474 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 TNFRSF4P43489 277 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 PPP1CAP62136 330 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 RBBP4Q09028 425 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 MAJINQ3KP22 176 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 ACER2Q5QJU3 275 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 IRAK1BP1Q5VVH5 260 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 SLC27A4Q6P1M0 643 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 PAPD4Q6PIY7 484 aaKnown RBP8.41□□□□□ -1.06
SF3B2-216ENST00000534765 ZNF765Q7L2R6 523 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 NRROSQ86YC3 692 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 ZNF671Q8TAW3 534 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 SGPP1Q9BX95 441 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 FOXQ1Q9C009 403 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 SEMA4CQ9C0C4 833 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 ZCCHC4Q9H5U6 513 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 CLMPQ9H6B4 373 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 FAM86C1Q9NVL1 165 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 GPATCH2Q9NW75 528 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 PURGQ9UJV8 347 aaKnown RBP8.41□□□□□ -1.06
SF3B2-216ENST00000534765 PLEKHA6Q9Y2H5 1048 aa8.41□□□□□ -1.06
SF3B2-216ENST00000534765 A0A0G2JN53 185 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 OR14I1A6ND48 311 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 AIPO00170 330 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 AKR7A3O95154 331 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 ANKRD34CP0C6C1 535 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 ENGP17813 658 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 GZMMP51124 257 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 CLDN8P56748 225 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 NCMAPQ5T1S8 102 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 CAPN13Q6MZZ7 669 aaPredicted RBP8.4□□□□□ -1.06
SF3B2-216ENST00000534765 H3F3CQ6NXT2 135 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 LYPD4Q6UWN0 246 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 TCEANCQ8N8B7 351 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 PINK1Q9BXM7 581 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 CA14Q9ULX7 337 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 FLVCR2Q9UPI3 526 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 CACNA1IQ9P0X4 2223 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 MGAT4DA6NG13 374 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 C1QTNF3-AMACRE9PGA6 284 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 AGPAT2O15120 278 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 S100A8P05109 93 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 CELP19835 753 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 CSF2RBP32927 897 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 GMFBP60983 142 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 UBE2IP63279 158 aaKnown RBP8.4□□□□□ -1.06
SF3B2-216ENST00000534765 ILF3Q12906 894 aaKnown RBP eCLIP8.4□□□□□ -1.06
SF3B2-216ENST00000534765 SLC5A12Q1EHB4 618 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 OR2G6Q5TZ20 316 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 FRG2Q64ET8 278 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 OR4F3Q6IEY1 312 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 ZNF730Q6ZMV8 503 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 LRRC70Q7Z2Q7 622 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 SVBPQ8N300 66 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 ACOT11Q8WXI4 607 aaPredicted RBP8.4□□□□□ -1.06
SF3B2-216ENST00000534765 C14orf79Q96F83 325 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 PPP1R16AQ96I34 528 aa8.4□□□□□ -1.06
SF3B2-216ENST00000534765 GUCD1Q96NT3 240 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms