RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 HMGXB4Q9UGU5 601 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 LGALS13Q9UHV8 139 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 GNPTGQ9UJJ9 305 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 PLEKHA6Q9Y2H5 1048 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 MRPS7Q9Y2R9 242 aaKnown RBP2.93□□□□□ -1.94
USP48-215ENST00000534705 USH1CQ9Y6N9 552 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 PIEZO1Q92508 2521 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 KNL1Q8NG31 2342 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 TRPM6Q9BX84 2022 aa2.93□□□□□ -1.94
USP48-215ENST00000534705 SCN8AQ9UQD0 1980 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 GVINP1Q7Z2Y8 2422 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 CEP250Q9BV73 2442 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 CABIN1Q9Y6J0 2220 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 PLXNB3Q9ULL4 1909 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 IQANK1A0A1B0GTG1 560 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 C2orf92A0A1B0GVN3 265 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 FAM230AA0A1W2PPH8 454 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 MYBPHLA2RUH7 354 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 MIF4GDA9UHW6 222 aaKnown RBP2.92□□□□□ -1.94
USP48-215ENST00000534705 H0YJX3 145 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 BET1O15155 118 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 EPHB6O15197 1021 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 PI15O43692 258 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 CALUO43852 315 aaPredicted RBP2.92□□□□□ -1.94
USP48-215ENST00000534705 CYTIPO60759 359 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 FKBP6O75344 327 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 SCGB2A1O75556 95 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 NOL4O94818 638 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 GLCEO94923 617 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 PRAMEF12O95522 483 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 ASS1P00966 412 aaKnown RBP2.92□□□□□ -1.94
USP48-215ENST00000534705 HLA-DRAP01903 254 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 TNNC2P02585 160 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 APOEP02649 317 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 C9P02748 559 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 DLATP10515 647 aaKnown RBP2.92□□□□□ -1.94
USP48-215ENST00000534705 TNNI1P19237 187 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 PRKACBP22694 351 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 IL32P24001 234 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 CCNE1P24864 410 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 CYP2F1P24903 491 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 CXCR2P25025 360 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 GDI1P31150 447 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 TIA1P31483 386 aaKnown RBP eCLIP2.92□□□□□ -1.943e-8■■■□□ 15.4
USP48-215ENST00000534705 NKX2-1P43699 371 aaPredicted RBP2.92□□□□□ -1.94
USP48-215ENST00000534705 PITPNBP48739 271 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 LHX1P48742 406 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 SERPINH1P50454 418 aaKnown RBP2.92□□□□□ -1.94
USP48-215ENST00000534705 UCP2P55851 309 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 ARPP19P56211 112 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 ACTR3P61158 418 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 NAA20P61599 178 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 CDK16Q00536 496 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 GALK2Q01415 458 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 INCA1Q0VD86 236 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 TRAP1Q12931 704 aaKnown RBP2.92□□□□□ -1.94
USP48-215ENST00000534705 PPP1R8Q12972 351 aaKnown RBP2.92□□□□□ -1.94
USP48-215ENST00000534705 ABRQ12979 859 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 DNAJC3Q13217 504 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 MAPRE2Q15555 327 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 NPTX1Q15818 432 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 TRMT5Q32P41 509 aaKnown RBP2.92□□□□□ -1.94
USP48-215ENST00000534705 FAM174BQ3ZCQ3 159 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 NADK2Q4G0N4 442 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 TMEM31Q5JXX7 168 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 SPATA46Q5T0L3 261 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 LIN9Q5TKA1 542 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 LCN1P1Q5VSP4 162 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 LRRC38Q5VT99 294 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 SDHAF4Q5VUM1 108 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 PRAMEF8Q5VWM4 474 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 LYSMD4Q5XG99 296 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 NANOGP8Q6NSW7 305 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 UGT3A1Q6NUS8 523 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 RFWD3Q6PCD5 774 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 TMEM207Q6UWW9 146 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 VITQ6UXI7 678 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 TMEM182Q6ZP80 229 aaPredicted RBP2.92□□□□□ -1.94
USP48-215ENST00000534705 RFPL4BQ6ZWI9 263 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 PRSS42Q7Z5A4 293 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 LRRTM1Q86UE6 522 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 SERPINA12Q8IW75 414 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 SLC38A6Q8IZM9 456 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 TMEM86AQ8N2M4 240 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 TMEM105Q8N8V8 129 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 MINDY2Q8NBR6 621 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 LEMD2Q8NC56 503 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 PRSS33Q8NF86 280 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 OCC1Q8TAD7 63 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 SPPL2BQ8TCT7 592 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 C2orf15Q8WU43 125 aaKnown RBP2.92□□□□□ -1.94
USP48-215ENST00000534705 SMAP2Q8WU79 429 aaPredicted RBP2.92□□□□□ -1.94
USP48-215ENST00000534705 FAM172AQ8WUF8 416 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 ING5Q8WYH8 240 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 ZNF75CPQ92670 426 aaPredicted RBP2.92□□□□□ -1.94
USP48-215ENST00000534705 SLCO2A1Q92959 643 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 BORCS5Q969J3 196 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 PSMG2Q969U7 264 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 SLC35C1Q96A29 364 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 CCDC127Q96BQ5 260 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms