RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 TESMINQ9Y4I5 508 aa7.84□□□□□ -1.15
COPB1-210ENST00000533533 PCDHB14Q9Y5E9 798 aa7.84□□□□□ -1.15
COPB1-210ENST00000533533 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 A0A1W2PP18 115 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 EVPLLA8MZ36 301 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 SHISA8B8ZZ34 492 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 C5orf58C9J3I9 102 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 H3BML4 177 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 SIAH2O43255 324 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 TNFRSF21O75509 655 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 TNFSF13O75888 250 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 H6PDO95479 791 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 BCHEP06276 602 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 NGFRP08138 427 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 ZCCHC18P0CG32 403 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 CHMP24386 653 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 PCSK6P29122 969 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 PCYT1AP49585 367 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 STARP49675 285 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 LHX2P50458 406 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 GFRA1P56159 465 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 CHRNEQ04844 493 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 NFYCQ13952 458 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 NDUFAF6Q330K2 333 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 PPP4R4Q6NUP7 873 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 DHDDSQ86SQ9 333 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 MISPQ8IVT2 679 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 UBQLNLQ8IYU4 475 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 ZNF619Q8N2I2 560 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 FADS6Q8N9I5 356 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 RNF138Q8WVD3 245 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 STON2Q8WXE9 905 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 C1GALT1C1Q96EU7 318 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 Q96MF0 132 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 WFIKKN1Q96NZ8 548 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 ZNF317Q96PQ6 595 aaPredicted RBP7.83□□□□□ -1.16
COPB1-210ENST00000533533 BDH2Q9BUT1 245 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 QRSL1Q9H0R6 528 aaKnown RBP7.83□□□□□ -1.16
COPB1-210ENST00000533533 RAD21L1Q9H4I0 556 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 HHATLQ9HCP6 504 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 C6orf203Q9P0P8 240 aaPredicted RBP7.83□□□□□ -1.16
COPB1-210ENST00000533533 SLAMF8Q9P0V8 285 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 CLCF1Q9UBD9 225 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 P2RX2Q9UBL9 471 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 LIPT1Q9Y234 373 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 DTNAQ9Y4J8 743 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 FREM1Q5H8C1 2179 aa7.83□□□□□ -1.16
COPB1-210ENST00000533533 LOC100653049A0A140TA62 436 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 A0A1W2PNV4 684 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 A0A1W2PQD3 144 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 PRAMEF27A3QJZ7 478 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 SERINC4A6NH21 518 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 DEFB108AA8MXU0 73 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 MSTNO14793 375 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 SMAD7O15105 426 aaKnown RBP7.82□□□□□ -1.16
COPB1-210ENST00000533533 ZNF264O43296 627 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 SEC14L5O43304 696 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 OIP5O43482 229 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 KIAA0513O60268 411 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 UGT2B17O75795 530 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 KRT34O76011 436 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 TGM6O95932 706 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 CSTAP01040 98 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 UBTFL6P0CB48 400 aaPredicted RBP7.82□□□□□ -1.16
COPB1-210ENST00000533533 UBL4AP11441 157 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 FPR1P21462 350 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 PPIBP23284 216 aaKnown RBP7.82□□□□□ -1.16
COPB1-210ENST00000533533 LSP1P33241 339 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 CPOXP36551 454 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 CLDN18P56856 261 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 TXNL4AP83876 142 aaKnown RBP7.82□□□□□ -1.16
COPB1-210ENST00000533533 ZNF117Q03924 483 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 FAM27E3Q08E93 113 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 FUT5Q11128 374 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 KLF10Q13118 480 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 GNA13Q14344 377 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 GANABQ14697 944 aaKnown RBP7.82□□□□□ -1.16
COPB1-210ENST00000533533 MAPRE2Q15555 327 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 ACKR1Q16570 336 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 KLHL26Q53HC5 615 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 TYW3Q6IPR3 259 aaKnown RBP7.82□□□□□ -1.16
COPB1-210ENST00000533533 HEPHL1Q6MZM0 1159 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 FRRS1Q6ZNA5 592 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 EIF3MQ7L2H7 374 aaKnown RBP7.82□□□□□ -1.16
COPB1-210ENST00000533533 CHMP1BQ7LBR1 199 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 SPATA21Q7Z572 469 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 MTERF4Q7Z6M4 381 aaKnown RBP7.82□□□□□ -1.16
COPB1-210ENST00000533533 YTHDF3Q7Z739 585 aaKnown RBP7.82□□□□□ -1.16
COPB1-210ENST00000533533 GRAMD2AQ8IUY3 354 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 C10orf82Q8WW14 230 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 TRNT1Q96Q11 434 aaKnown RBP7.82□□□□□ -1.16
COPB1-210ENST00000533533 CCL19Q99731 98 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 PIGQQ9BRB3 760 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 THUMPD3Q9BV44 507 aaKnown RBP7.82□□□□□ -1.16
COPB1-210ENST00000533533 NMUR2Q9GZQ4 415 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 ZNF350Q9GZX5 532 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 ZNF385DQ9H6B1 395 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 SAR1AQ9NR31 198 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 POLE3Q9NRF9 147 aa7.82□□□□□ -1.16
COPB1-210ENST00000533533 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms