RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 FTMTQ8N4E7 242 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 AMBRA1Q9C0C7 1298 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 IL21Q9HBE4 155 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 AKR1C4P17516 323 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 SLC6A12P48065 614 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 SNU13P55769 128 aaKnown RBP16.38■□□□□ 0.21
PHRF1-205ENST00000533464 RNF113BQ8IZP6 322 aaKnown RBP16.38■□□□□ 0.21
PHRF1-205ENST00000533464 PARP16Q8N5Y8 322 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 RHBDD1Q8TEB9 315 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 NINJ1Q92982 152 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 DPCDQ9BVM2 203 aaPredicted RBP16.38■□□□□ 0.21
PHRF1-205ENST00000533464 ZNF442Q9H7R0 627 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 MED20Q9H944 212 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 B3GNT3Q9Y2A9 372 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 ECM29Q5VYK3 1845 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 BLACEA4D250 179 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 HMGB3O15347 200 aaKnown RBP16.37■□□□□ 0.21
PHRF1-205ENST00000533464 EGFP01133 1207 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 IL1AP01583 271 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 ELAVL4P26378 380 aaKnown RBP16.37■□□□□ 0.21
PHRF1-205ENST00000533464 RPS5P46782 204 aaKnown RBP16.37■□□□□ 0.21
PHRF1-205ENST00000533464 SNRPD2P62316 118 aaKnown RBP16.37■□□□□ 0.21
PHRF1-205ENST00000533464 ABHD17BQ5VST6 288 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 SFXN2Q96NB2 322 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 FOXN4Q96NZ1 517 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 THAP7Q9BT49 309 aaPredicted RBP16.37■□□□□ 0.21
PHRF1-205ENST00000533464 INPP5EQ9NRR6 644 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 ASB4Q9Y574 426 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 STRCQ7RTU9 1775 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 PET100P0DJ07 73 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 PHC2Q8IXK0 858 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 LRRC56Q8IYG6 542 aaPredicted RBP16.37■□□□□ 0.21
PHRF1-205ENST00000533464 SLC16A11Q8NCK7 471 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 ELP4Q96EB1 424 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 UBQLN2Q9UHD9 624 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 NUP50Q9UKX7 468 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 A0A1W2PQ09 198 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 SMAD2Q15796 467 aaKnown RBP16.37■□□□□ 0.21
PHRF1-205ENST00000533464 LSM14AQ8ND56 463 aaKnown RBP16.37■□□□□ 0.21
PHRF1-205ENST00000533464 UBE2FQ969M7 185 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 HYLS1Q96M11 299 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 PRR14Q9BWN1 585 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 PCP4L1A6NKN8 68 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 GJE1A6NN92 205 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 TARM1B6A8C7 271 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 F5H5K5 113 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 BCAT2O15382 392 aaPredicted RBP16.37■□□□□ 0.21
PHRF1-205ENST00000533464 PKLRP30613 574 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 SELENOVP59797 346 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 MALLQ13021 153 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 AIMP2Q13155 320 aaKnown RBP16.37■□□□□ 0.21
PHRF1-205ENST00000533464 MTFR2Q6P444 385 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 OR2T35Q8NGX2 323 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 NPRL2Q8WTW4 380 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 OR1E3Q8WZA6 343 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 C7orf34Q96L11 122 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 EVA1AQ9H8M9 152 aa16.37■□□□□ 0.21
PHRF1-205ENST00000533464 ZNF264O43296 627 aa16.36■□□□□ 0.21
PHRF1-205ENST00000533464 KLK8O60259 260 aa16.36■□□□□ 0.21
PHRF1-205ENST00000533464 COL28A1Q2UY09 1125 aa16.36■□□□□ 0.21
PHRF1-205ENST00000533464 LAS2Q8IYD9 372 aa16.36■□□□□ 0.21
PHRF1-205ENST00000533464 OR13H1Q8NG92 308 aa16.36■□□□□ 0.21
PHRF1-205ENST00000533464 ITPKCQ96DU7 683 aa16.36■□□□□ 0.21
PHRF1-205ENST00000533464 SIDT1Q9NXL6 827 aaKnown RBP16.36■□□□□ 0.21
PHRF1-205ENST00000533464 LTBP4Q8N2S1 1624 aa16.36■□□□□ 0.21
PHRF1-205ENST00000533464 ANKRD28O15084 1053 aa16.36■□□□□ 0.21
PHRF1-205ENST00000533464 DUSP7Q16829 419 aa16.36■□□□□ 0.21
PHRF1-205ENST00000533464 ITFG2Q969R8 447 aa16.36■□□□□ 0.21
PHRF1-205ENST00000533464 MRPL38Q96DV4 380 aaKnown RBP16.36■□□□□ 0.21
PHRF1-205ENST00000533464 TNFRSF13CQ96RJ3 184 aa16.36■□□□□ 0.21
PHRF1-205ENST00000533464 DUSP23Q9BVJ7 150 aa16.36■□□□□ 0.21
PHRF1-205ENST00000533464 PPIL3Q9H2H8 161 aaKnown RBP16.36■□□□□ 0.21
PHRF1-205ENST00000533464 WASF3Q9UPY6 502 aa16.36■□□□□ 0.21
PHRF1-205ENST00000533464 EEF1E1-BLOC1S5C9J1V9 151 aa16.36■□□□□ 0.21
PHRF1-205ENST00000533464 FOLR3P41439 243 aa16.36■□□□□ 0.21
PHRF1-205ENST00000533464 CAV3P56539 151 aa16.36■□□□□ 0.21
PHRF1-205ENST00000533464 NR0B2Q15466 257 aa16.36■□□□□ 0.21
PHRF1-205ENST00000533464 NKPD1Q17RQ9 610 aa16.36■□□□□ 0.21
PHRF1-205ENST00000533464 LRIT2A6NDA9 550 aa16.36■□□□□ 0.21
PHRF1-205ENST00000533464 A6NLC8 198 aa16.36■□□□□ 0.21
PHRF1-205ENST00000533464 ADARB1P78563 741 aaKnown RBP16.36■□□□□ 0.21
PHRF1-205ENST00000533464 GPR139Q6DWJ6 353 aa16.36■□□□□ 0.21
PHRF1-205ENST00000533464 CYHR1Q6ZMK1 362 aa16.36■□□□□ 0.21
PHRF1-205ENST00000533464 MBOAT2Q6ZWT7 520 aa16.36■□□□□ 0.21
PHRF1-205ENST00000533464 A0A1B0GTL3 188 aa16.35■□□□□ 0.21
PHRF1-205ENST00000533464 SYT5O00445 386 aa16.35■□□□□ 0.21
PHRF1-205ENST00000533464 MPIG6BO95866 241 aa16.35■□□□□ 0.21
PHRF1-205ENST00000533464 RSU1Q15404 277 aa16.35■□□□□ 0.21
PHRF1-205ENST00000533464 SF3A2Q15428 464 aaKnown RBP16.35■□□□□ 0.21
PHRF1-205ENST00000533464 SLC6A19Q695T7 634 aa16.35■□□□□ 0.21
PHRF1-205ENST00000533464 KDM4DQ6B0I6 523 aa16.35■□□□□ 0.21
PHRF1-205ENST00000533464 PPP1R3BQ86XI6 285 aa16.35■□□□□ 0.21
PHRF1-205ENST00000533464 MAP3K3Q99759 626 aa16.35■□□□□ 0.21
PHRF1-205ENST00000533464 SLC25A37Q9NYZ2 338 aa16.35■□□□□ 0.21
PHRF1-205ENST00000533464 CACNG2Q9Y698 323 aa16.35■□□□□ 0.21
PHRF1-205ENST00000533464 V9GY05 133 aa16.35■□□□□ 0.21
PHRF1-205ENST00000533464 TRBV11-1A0A0K0K1C0 115 aa16.35■□□□□ 0.21
PHRF1-205ENST00000533464 H7C417 338 aa16.35■□□□□ 0.21
PHRF1-205ENST00000533464 FZD6O60353 706 aa16.35■□□□□ 0.21
PHRF1-205ENST00000533464 LCATP04180 440 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms