RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 ADGRF5Q8IZF2 1346 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 TEX13DA0A0J9YY54 714 aaPredicted RBP5.09□□□□□ -1.59
CD44-236ENST00000533222 TMEM72A0PK05 275 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 NKX6-3A6NJ46 265 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 DUXAA6NLW8 204 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 M0QYG6 137 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 M0R233 179 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 FOXE1O00358 373 aaPredicted RBP5.09□□□□□ -1.59
CD44-236ENST00000533222 SLC33A1O00400 549 aaPredicted RBP5.09□□□□□ -1.59
CD44-236ENST00000533222 MBTPS2O43462 519 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 KDELR3O43731 214 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 WBP4O75554 376 aaKnown RBP5.09□□□□□ -1.59
CD44-236ENST00000533222 ERAL1O75616 437 aaKnown RBP5.09□□□□□ -1.59
CD44-236ENST00000533222 RP2O75695 350 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 DFFBO76075 338 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 KDM4BO94953 1096 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 GPANK1O95872 356 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 MT-ND2P03891 347 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 ANXA1P04083 346 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 CFIP05156 583 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 HTR1AP08908 422 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 C1GALT1C1LP0DN25 315 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 NR2F6P10588 404 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 THRBP10828 461 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 CETPP11597 493 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 TPH1P17752 444 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 SDC1P18827 310 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 TSPAN8P19075 237 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 SRMP19623 302 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 GLRA1P23415 457 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 KDELR1P24390 212 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 TLX1P31314 330 aaPredicted RBP5.09□□□□□ -1.59
CD44-236ENST00000533222 FMO3P31513 532 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 OTX2P32243 289 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 SHMT2P34897 504 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 LIPAP38571 399 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 MATKP42679 507 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 TECP42680 631 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 KCNJ1P48048 391 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 TDGF1P3P51864 188 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 SMSP52788 366 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 TMEM33P57088 247 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 SELENOTP62341 195 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 CCL7P80098 99 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 SIM1P81133 766 aaPredicted RBP5.09□□□□□ -1.59
CD44-236ENST00000533222 IL5RAQ01344 420 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 CHRNB3Q05901 458 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 FOXE3Q13461 319 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 MADCAM1Q13477 382 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 TUBB3Q13509 450 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 GAMTQ14353 236 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 ABRAXAS2Q15018 415 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 PTGES3Q15185 160 aaKnown RBP5.09□□□□□ -1.59
CD44-236ENST00000533222 KCTD19Q17RG1 926 aaPredicted RBP5.09□□□□□ -1.59
CD44-236ENST00000533222 TMEM241Q24JQ0 296 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 BEAN1Q3B7T3 259 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 TEX44Q53QW1 395 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 CYBRD1Q53TN4 286 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 MIIPQ5JXC2 388 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 ACAD10Q6JQN1 1059 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 FAM198BQ6UWH4 519 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 CASP12Q6UXS9 341 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 FBXW12Q6X9E4 464 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 C3P1Q6ZMU1 363 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 LINC00696Q6ZRV3 163 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 SLC35D2Q76EJ3 337 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 NAA40Q86UY6 237 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 CYP4Z1Q86W10 505 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 NUDT13Q86X67 352 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 RNF130Q86XS8 419 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 CACUL1Q86Y37 369 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 FUNDC1Q8IVP5 155 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 TUSC5Q8IXB3 177 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 DAW1Q8N136 415 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 CFAP52Q8N1V2 620 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 ZCCHC9Q8N567 271 aaKnown RBP5.09□□□□□ -1.59
CD44-236ENST00000533222 LRRC52Q8N7C0 313 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 ZNF557Q8N988 423 aaPredicted RBP5.09□□□□□ -1.59
CD44-236ENST00000533222 LMNTD1Q8N9Z9 388 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 Q8NA96 180 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 KCTD6Q8NC69 237 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 OR5T3Q8NGG3 340 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 OR9A4Q8NGU2 314 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 SPPL2BQ8TCT7 592 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 RNASEH2CQ8TDP1 164 aaKnown RBP5.09□□□□□ -1.59
CD44-236ENST00000533222 SLC25A43Q8WUT9 341 aaPredicted RBP5.09□□□□□ -1.59
CD44-236ENST00000533222 ACOT12Q8WYK0 555 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 TFGQ92734 400 aaPredicted RBP5.09□□□□□ -1.59
CD44-236ENST00000533222 SEMA4DQ92854 862 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 SLC35C1Q96A29 364 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 CTHRC1Q96CG8 243 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 MRPS24Q96EL2 167 aaKnown RBP5.09□□□□□ -1.59
CD44-236ENST00000533222 PHYHIPLQ96FC7 376 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 C4orf36Q96KX1 117 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 FCRL1Q96LA6 429 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 OR2M2Q96R28 347 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 CNN2Q99439 309 aaKnown RBP5.09□□□□□ -1.59
CD44-236ENST00000533222 S100A13Q99584 98 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 MSTO1Q9BUK6 570 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 MLST8Q9BVC4 326 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms