RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 NTSP30990 170 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 TIA1P31483 386 aaKnown RBP eCLIP10.98□□□□□ -0.65
CAPN1-223ENST00000533079 RFX3P48380 749 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 KRT6CP48668 564 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 RPL14P50914 215 aaKnown RBP10.98□□□□□ -0.65
CAPN1-223ENST00000533079 MANFP55145 182 aaKnown RBP10.98□□□□□ -0.65
CAPN1-223ENST00000533079 SRSF2Q01130 221 aaKnown RBP10.98□□□□□ -0.65
CAPN1-223ENST00000533079 ACSM2AQ08AH3 577 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 ACSM2BQ68CK6 577 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 SLC22A25Q6T423 547 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 KLHL17Q6TDP4 642 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 C12orf54Q6X4T0 127 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 ZCCHC23Q6ZST2 131 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 IL17RELQ6ZVW7 336 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 DEPDC4Q8N2C3 294 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 RFWD2Q8NHY2 731 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 ZNF483Q8TF39 744 aaPredicted RBP10.98□□□□□ -0.65
CAPN1-223ENST00000533079 C16orf78Q8WTQ4 265 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 PIMREGQ9BSJ6 248 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 TMEM120AQ9BXJ8 343 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 ADAM19Q9H013 955 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 MYLK2Q9H1R3 596 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 EML4Q9HC35 981 aaKnown RBP10.98□□□□□ -0.65
CAPN1-223ENST00000533079 MYOZ1Q9NP98 299 aaPredicted RBP10.98□□□□□ -0.65
CAPN1-223ENST00000533079 MIEF1Q9NQG6 463 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 NPAP1Q9NZP6 1156 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 FKBP7Q9Y680 259 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 A0A0G2JND7 137 aa10.97□□□□□ -0.65
CAPN1-223ENST00000533079 A0A1W2PQD3 144 aa10.97□□□□□ -0.65
CAPN1-223ENST00000533079 SLC35F4A4IF30 521 aa10.97□□□□□ -0.65
CAPN1-223ENST00000533079 A8MT66 165 aa10.97□□□□□ -0.65
CAPN1-223ENST00000533079 VWC2LB2RUY7 222 aa10.97□□□□□ -0.65
CAPN1-223ENST00000533079 E7EQL1 145 aa10.97□□□□□ -0.65
CAPN1-223ENST00000533079 RGS14O43566 566 aa10.97□□□□□ -0.65
CAPN1-223ENST00000533079 HSPA4LO95757 839 aa10.97□□□□□ -0.65
CAPN1-223ENST00000533079 JUNP05412 331 aaKnown RBP10.97□□□□□ -0.65
CAPN1-223ENST00000533079 APEHP13798 732 aaKnown RBP10.97□□□□□ -0.65
CAPN1-223ENST00000533079 CFPP27918 469 aa10.97□□□□□ -0.65
CAPN1-223ENST00000533079 ARRB2P32121 409 aa10.97□□□□□ -0.65
CAPN1-223ENST00000533079 SFTPDP35247 375 aa10.97□□□□□ -0.65
CAPN1-223ENST00000533079 FABP6P51161 128 aa10.97□□□□□ -0.65
CAPN1-223ENST00000533079 RAE1P78406 368 aaKnown RBP10.97□□□□□ -0.65
CAPN1-223ENST00000533079 CHRNB3Q05901 458 aa10.97□□□□□ -0.65
CAPN1-223ENST00000533079 ZNF763Q0D2J5 394 aa10.97□□□□□ -0.65
CAPN1-223ENST00000533079 KRT72Q14CN4 511 aa10.97□□□□□ -0.65
CAPN1-223ENST00000533079 ARL13AQ5H913 290 aaPredicted RBP10.97□□□□□ -0.65
CAPN1-223ENST00000533079 ZFAND2BQ8WV99 257 aa10.97□□□□□ -0.65
CAPN1-223ENST00000533079 MSI2Q96DH6 328 aaKnown RBP10.97□□□□□ -0.65
CAPN1-223ENST00000533079 NPAS1Q99742 590 aa10.97□□□□□ -0.65
CAPN1-223ENST00000533079 PSD2Q9BQI7 771 aa10.97□□□□□ -0.65
CAPN1-223ENST00000533079 SRXN1Q9BYN0 137 aa10.97□□□□□ -0.65
CAPN1-223ENST00000533079 SIRT5Q9NXA8 310 aa10.97□□□□□ -0.65
CAPN1-223ENST00000533079 TAS2R7Q9NYW3 318 aa10.97□□□□□ -0.65
CAPN1-223ENST00000533079 DCTN4Q9UJW0 460 aa10.97□□□□□ -0.65
CAPN1-223ENST00000533079 RRP15Q9Y3B9 282 aaKnown RBP10.97□□□□□ -0.65
CAPN1-223ENST00000533079 PMF1-BGLAPU3KQ54 211 aa10.97□□□□□ -0.65
CAPN1-223ENST00000533079 YLPM1P49750 1951 aaKnown RBP10.96□□□□□ -0.65
CAPN1-223ENST00000533079 MANBAO00462 879 aa10.96□□□□□ -0.65
CAPN1-223ENST00000533079 HDAC3O15379 428 aa10.96□□□□□ -0.65
CAPN1-223ENST00000533079 KIAA0513O60268 411 aa10.96□□□□□ -0.65
CAPN1-223ENST00000533079 LYPLA1O75608 230 aaPredicted RBP10.96□□□□□ -0.65
CAPN1-223ENST00000533079 OPN1LWP04000 364 aa10.96□□□□□ -0.65
CAPN1-223ENST00000533079 FGF4P08620 206 aa10.96□□□□□ -0.65
CAPN1-223ENST00000533079 LINGO3P0C6S8 592 aa10.96□□□□□ -0.65
CAPN1-223ENST00000533079 HPGDP15428 266 aa10.96□□□□□ -0.65
CAPN1-223ENST00000533079 GABRA3P34903 492 aa10.96□□□□□ -0.65
CAPN1-223ENST00000533079 NR4A2P43354 598 aa10.96□□□□□ -0.65
CAPN1-223ENST00000533079 PDLIM4P50479 330 aa10.96□□□□□ -0.65
CAPN1-223ENST00000533079 AQP5P55064 265 aa10.96□□□□□ -0.65
CAPN1-223ENST00000533079 GGTLC2Q14390 218 aa10.96□□□□□ -0.65
CAPN1-223ENST00000533079 CFAP157Q5JU67 520 aa10.96□□□□□ -0.65
CAPN1-223ENST00000533079 BHLHB9Q6PI77 547 aa10.96□□□□□ -0.65
CAPN1-223ENST00000533079 EPGNQ6UW88 154 aa10.96□□□□□ -0.65
CAPN1-223ENST00000533079 B4GALNT2Q8NHY0 566 aa10.96□□□□□ -0.65
CAPN1-223ENST00000533079 POC1BQ8TC44 478 aa10.96□□□□□ -0.65
CAPN1-223ENST00000533079 FAM110BQ8TC76 370 aa10.96□□□□□ -0.65
CAPN1-223ENST00000533079 ZFP90Q8TF47 636 aa10.96□□□□□ -0.65
CAPN1-223ENST00000533079 HOXB13Q92826 284 aaPredicted RBP10.96□□□□□ -0.65
CAPN1-223ENST00000533079 ELP4Q96EB1 424 aa10.96□□□□□ -0.65
CAPN1-223ENST00000533079 INPP5KQ9BT40 448 aa10.96□□□□□ -0.65
CAPN1-223ENST00000533079 ACPTQ9BZG2 426 aa10.96□□□□□ -0.65
CAPN1-223ENST00000533079 UBQLN4Q9NRR5 601 aa10.96□□□□□ -0.65
CAPN1-223ENST00000533079 PNPOQ9NVS9 261 aa10.96□□□□□ -0.65
CAPN1-223ENST00000533079 STK38LQ9Y2H1 464 aa10.96□□□□□ -0.65
CAPN1-223ENST00000533079 WBP11Q9Y2W2 641 aaKnown RBP10.96□□□□□ -0.65
CAPN1-223ENST00000533079 ZNF724A8MTY0 619 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 SCDO00767 359 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 ULK1O75385 1050 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 DNAJC8O75937 253 aaPredicted RBP10.95□□□□□ -0.66
CAPN1-223ENST00000533079 UBOX5O94941 541 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 OR4F21O95013 312 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 NKX2-2O95096 273 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 NTN1O95631 604 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 IGKV1D-16P01601 117 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 ANXA4P09525 319 aaPredicted RBP10.95□□□□□ -0.66
CAPN1-223ENST00000533079 PTNP21246 168 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 IGHV1-2P23083 117 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 CD40P25942 277 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 MAP3K8P41279 467 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 IDH3AP50213 366 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms