RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 SLC43A1O75387 559 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 MPIG6BO95866 241 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 RBM39Q14498 530 aaKnown RBP13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 CCSMST1Q4G0I0 132 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 CD93Q9NPY3 652 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 SPHK1Q9NYA1 384 aa13.82□□□□□ -0.2
PCDHA9-202ENST00000532602 TRAV18A0A075B6X5 111 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 MT-CO2P00403 227 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 KCNJ10P78508 379 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 NTRK2Q16620 822 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 PXKQ7Z7A4 578 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 ZNF775Q96BV0 537 aaPredicted RBP13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 RANBP3Q9H6Z4 567 aaPredicted RBP13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 FGF21Q9NSA1 209 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 WIF1Q9Y5W5 379 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 CSNK1G3Q9Y6M4 447 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 TRAV27A0A087WT01 109 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 SLC5A2P31639 672 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 MMP12P39900 470 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 OR5D14Q8NGL3 314 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 SGCZQ96LD1 299 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 ZNF578Q96N58 590 aaPredicted RBP13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 PLEKHA3Q9HB20 300 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 GABRB3P28472 473 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 IMPA1P29218 277 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 LTB4RQ15722 352 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 ZNF750Q32MQ0 723 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 KCTD11Q693B1 232 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 FNDC8Q8TC99 324 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 TMEM174Q8WUU8 243 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 OR2S2Q9NQN1 319 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 TMEM202A6NGA9 273 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 PRAMEF20Q5VT98 475 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 TSSK4Q6SA08 328 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 CPT1CQ8TCG5 803 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 WDR83Q9BRX9 315 aaKnown RBP13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 PHF7Q9BWX1 381 aaPredicted RBP13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 SMOXQ9NWM0 555 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 HHLA2Q9UM44 414 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 ZNF443Q9Y2A4 671 aaPredicted RBP13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 TP53TG5Q9Y2B4 290 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 SIPA1L3O60292 1781 aaPredicted RBP13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 TLCD2A6NGC4 264 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 HYAL4Q2M3T9 481 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 GARNL3Q5VVW2 1013 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 METTL4Q8N3J2 472 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 OR1J4Q8NGS1 313 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 LMF1Q96S06 567 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 CACNG6Q9BXT2 260 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 DOCK1Q14185 1865 aa13.81□□□□□ -0.2
PCDHA9-202ENST00000532602 KRBA1A5PL33 1030 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 OR5K3A6NET4 321 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 AKR1C4P17516 323 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 NPR2P20594 1047 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 ETV4P43268 484 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 C18orf63Q68DL7 685 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 FOXRED1Q96CU9 486 aaPredicted RBP13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 APMAPQ9HDC9 416 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 DCAF13Q9NV06 445 aaKnown RBP13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 PLEKHJ1Q9NW61 149 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 NME7Q9Y5B8 376 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 LRP5O75197 1615 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 ADAMTSL1Q8N6G6 1762 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 SERPINE2P07093 398 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 SYPL1Q16563 259 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 KHSRPQ92945 711 aaKnown RBP eCLIP13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 C7orf34Q96L11 122 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 MICU1Q9BPX6 476 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 TWSG1Q9GZX9 223 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 EPHX3Q9H6B9 360 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 MMACHCQ9Y4U1 282 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 D6RAR5 112 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 ZNF264O43296 627 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 NARSO43776 548 aaKnown RBP13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 S100PP25815 95 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 LSSP48449 732 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 ERVK-25P63136 954 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 TNFRSF17Q02223 184 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 CHRNEQ04844 493 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 GPR50Q13585 617 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 KCNAB1Q14722 419 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 RTL6Q6ICC9 239 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 OR6Q1Q8NGQ2 317 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 BCL7BQ9BQE9 202 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 CHRM4P08173 479 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 ATP1B3P54709 279 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 ADPRHP54922 357 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 ADARB1P78563 741 aaKnown RBP13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 GGTA1PQ4G0N0 100 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 FAM83HQ6ZRV2 1179 aaPredicted RBP13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 SYNPOQ8N3V7 929 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 GLYATL2Q8WU03 294 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 MYEOVQ96EZ4 313 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 SENP5Q96HI0 755 aaPredicted RBP13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 DHRS4Q9BTZ2 278 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 QRSL1Q9H0R6 528 aaKnown RBP13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 ANKRD10Q9NXR5 420 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 MGAT4CQ9UBM8 478 aa13.8□□□□□ -0.2
PCDHA9-202ENST00000532602 C2CD4DB7Z1M9 353 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms