RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 ROBO4Q8WZ75 1007 aa16.92■□□□□ 0.3
SSH3-209ENST00000532600 OSTF1Q92882 214 aa16.92■□□□□ 0.3
SSH3-209ENST00000532600 SPDL1Q96EA4 605 aa16.92■□□□□ 0.3
SSH3-209ENST00000532600 HS3ST6Q96QI5 342 aa16.92■□□□□ 0.3
SSH3-209ENST00000532600 COQ10BQ9H8M1 238 aa16.92■□□□□ 0.3
SSH3-209ENST00000532600 TMEM45AQ9NWC5 275 aa16.92■□□□□ 0.3
SSH3-209ENST00000532600 ADAM21Q9UKJ8 722 aa16.92■□□□□ 0.3
SSH3-209ENST00000532600 PRAMEF27A3QJZ7 478 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 C16orf97H3BN30 126 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 ETV2O00321 342 aaPredicted RBP16.91■□□□□ 0.3
SSH3-209ENST00000532600 DNAJA2O60884 412 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 BCAS1O75363 584 aaPredicted RBP16.91■□□□□ 0.3
SSH3-209ENST00000532600 CD99P14209 185 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 HOXB9P17482 250 aaPredicted RBP16.91■□□□□ 0.3
SSH3-209ENST00000532600 KLK2P20151 261 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 ELK4P28324 431 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 EIF1P41567 113 aaKnown RBP16.91■□□□□ 0.3
SSH3-209ENST00000532600 SUMO3P55854 103 aaPredicted RBP16.91■□□□□ 0.3
SSH3-209ENST00000532600 ADAM8P78325 824 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 FOXD4Q12950 439 aaPredicted RBP16.91■□□□□ 0.3
SSH3-209ENST00000532600 KLF10Q13118 480 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 ZNF141Q15928 474 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 MAPK14Q16539 360 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 ZNF239Q16600 458 aaKnown RBP16.91■□□□□ 0.3
SSH3-209ENST00000532600 EXOC3L2Q2M3D2 409 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 ARHGAP11BQ3KRB8 267 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 PAGE3Q5JUK9 113 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 ANKRD34AQ69YU3 496 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 DNAJC14Q6Y2X3 702 aaPredicted RBP16.91■□□□□ 0.3
SSH3-209ENST00000532600 MSANTD1Q6ZTZ1 278 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 CPLX4Q7Z7G2 160 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 LSRQ86X29 649 aaPredicted RBP16.91■□□□□ 0.3
SSH3-209ENST00000532600 GTF2H4Q92759 462 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 SLC35G5Q96KT7 338 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 SLC39A3Q9BRY0 314 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 MED18Q9BUE0 208 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 PRRG4Q9BZD6 226 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 ZNF350Q9GZX5 532 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 NSRP1Q9H0G5 558 aaKnown RBP16.91■□□□□ 0.3
SSH3-209ENST00000532600 OR51I1Q9H343 314 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 DLL4Q9NR61 685 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 PAQR5Q9NXK6 330 aaPredicted RBP16.91■□□□□ 0.3
SSH3-209ENST00000532600 ARMCX1Q9P291 453 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 STOML1Q9UBI4 398 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 MKLN1Q9UL63 735 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 MCTS1Q9ULC4 181 aaKnown RBP16.91■□□□□ 0.3
SSH3-209ENST00000532600 EMC9Q9Y3B6 208 aa16.91■□□□□ 0.3
SSH3-209ENST00000532600 RAI1Q7Z5J4 1906 aaPredicted RBP16.91■□□□□ 0.3
SSH3-209ENST00000532600 SERINC4A6NH21 518 aa16.9■□□□□ 0.3
SSH3-209ENST00000532600 CCDC154A6NI56 674 aa16.9■□□□□ 0.3
SSH3-209ENST00000532600 CASKO14936 926 aa16.9■□□□□ 0.3
SSH3-209ENST00000532600 UGT2B17O75795 530 aa16.9■□□□□ 0.3
SSH3-209ENST00000532600 SOX30O94993 753 aa16.9■□□□□ 0.3
SSH3-209ENST00000532600 ADH6P28332 368 aa16.9■□□□□ 0.3
SSH3-209ENST00000532600 AGTR1P30556 359 aa16.9■□□□□ 0.3
SSH3-209ENST00000532600 KCNJ5P48544 419 aa16.9■□□□□ 0.3
SSH3-209ENST00000532600 CARD18P57730 90 aa16.9■□□□□ 0.3
SSH3-209ENST00000532600 PLAURQ03405 335 aa16.9■□□□□ 0.3
SSH3-209ENST00000532600 SKP2Q13309 424 aa16.9■□□□□ 0.3
SSH3-209ENST00000532600 KEAP1Q14145 624 aa16.9■□□□□ 0.3
SSH3-209ENST00000532600 SLC25A53Q5H9E4 307 aa16.9■□□□□ 0.3
SSH3-209ENST00000532600 SAXO2Q658L1 398 aa16.9■□□□□ 0.3
SSH3-209ENST00000532600 BHLHB9Q6PI77 547 aa16.9■□□□□ 0.3
SSH3-209ENST00000532600 STAC2Q6ZMT1 411 aa16.9■□□□□ 0.3
SSH3-209ENST00000532600 CXorf67Q86X51 503 aaPredicted RBP16.9■□□□□ 0.3
SSH3-209ENST00000532600 ZNF614Q8N883 585 aa16.9■□□□□ 0.3
SSH3-209ENST00000532600 VPS37AQ8NEZ2 397 aa16.9■□□□□ 0.3
SSH3-209ENST00000532600 OR5W2Q8NH69 310 aa16.9■□□□□ 0.3
SSH3-209ENST00000532600 RNF128Q8TEB7 428 aa16.9■□□□□ 0.3
SSH3-209ENST00000532600 ABHD3Q8WU67 409 aa16.9■□□□□ 0.3
SSH3-209ENST00000532600 PANX1Q96RD7 426 aa16.9■□□□□ 0.3
SSH3-209ENST00000532600 PAIP1Q9H074 479 aaKnown RBP16.9■□□□□ 0.3
SSH3-209ENST00000532600 SLAMF8Q9P0V8 285 aa16.9■□□□□ 0.3
SSH3-209ENST00000532600 GPC6Q9Y625 555 aaPredicted RBP16.9■□□□□ 0.3
SSH3-209ENST00000532600 PRR14LQ5THK1 2151 aa16.89■□□□□ 0.3
SSH3-209ENST00000532600 H3BNH8 94 aa16.89■□□□□ 0.29
SSH3-209ENST00000532600 GTPBP1O00178 669 aaKnown RBP16.89■□□□□ 0.29
SSH3-209ENST00000532600 ZNF264O43296 627 aa16.89■□□□□ 0.29
SSH3-209ENST00000532600 EIF4E2O60573 245 aaKnown RBP16.89■□□□□ 0.29
SSH3-209ENST00000532600 SYNGR4O95473 234 aa16.89■□□□□ 0.29
SSH3-209ENST00000532600 NUDT14O95848 222 aa16.89■□□□□ 0.29
SSH3-209ENST00000532600 OR12D1P0DN82 309 aa16.89■□□□□ 0.29
SSH3-209ENST00000532600 UBL4AP11441 157 aa16.89■□□□□ 0.29
SSH3-209ENST00000532600 UQCRC2P22695 453 aa16.89■□□□□ 0.29
SSH3-209ENST00000532600 ME2P23368 584 aa16.89■□□□□ 0.29
SSH3-209ENST00000532600 QPRTQ15274 297 aa16.89■□□□□ 0.29
SSH3-209ENST00000532600 GPR68Q15743 365 aa16.89■□□□□ 0.29
SSH3-209ENST00000532600 TMEM176BQ3YBM2 270 aaPredicted RBP16.89■□□□□ 0.29
SSH3-209ENST00000532600 AP1ARQ63HQ0 302 aa16.89■□□□□ 0.29
SSH3-209ENST00000532600 TYW3Q6IPR3 259 aaKnown RBP16.89■□□□□ 0.29
SSH3-209ENST00000532600 TNFAIP8L2Q6P589 184 aaPredicted RBP16.89■□□□□ 0.29
SSH3-209ENST00000532600 RETREG3Q86VR2 466 aa16.89■□□□□ 0.29
SSH3-209ENST00000532600 MSRB3Q8IXL7 192 aa16.89■□□□□ 0.29
SSH3-209ENST00000532600 WFDC11Q8NEX6 87 aa16.89■□□□□ 0.29
SSH3-209ENST00000532600 RAB8BQ92930 207 aa16.89■□□□□ 0.29
SSH3-209ENST00000532600 ZG16BQ96DA0 208 aa16.89■□□□□ 0.29
SSH3-209ENST00000532600 PIK3IP1Q96FE7 263 aa16.89■□□□□ 0.29
SSH3-209ENST00000532600 ZC3HAV1LQ96H79 300 aaKnown RBP16.89■□□□□ 0.29
SSH3-209ENST00000532600 CCT8L2Q96SF2 557 aa16.89■□□□□ 0.29
SSH3-209ENST00000532600 SLC35A5Q9BS91 424 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms