RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 DNAJB11Q9UBS4 358 aa5.28□□□□□ -1.56
HMGB1P42-201ENST00000532126 B4GALT7Q9UBV7 327 aa5.28□□□□□ -1.56
HMGB1P42-201ENST00000532126 ATP6V1HQ9UI12 483 aa5.28□□□□□ -1.56
HMGB1P42-201ENST00000532126 CNOT11Q9UKZ1 510 aaKnown RBP5.28□□□□□ -1.56
HMGB1P42-201ENST00000532126 BOKQ9UMX3 212 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P42-201ENST00000532126 SLC5A6Q9Y289 635 aa5.28□□□□□ -1.56
HMGB1P42-201ENST00000532126 OR10H1Q9Y4A9 318 aa5.28□□□□□ -1.56
HMGB1P42-201ENST00000532126 SESN1Q9Y6P5 492 aa5.28□□□□□ -1.56
HMGB1P42-201ENST00000532126 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.28□□□□□ -1.56
HMGB1P42-201ENST00000532126 SPENQ96T58 3664 aaKnown RBP5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 TRGV8A0A0C4DH27 118 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 GOLGA8QA0A0J9YX86 632 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 A0A1B0GTH9 108 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 A0A1B0GUH1 482 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 CLEC18AA5D8T8 446 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 GOLGA8OA6NCC3 632 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 OR6C70A6NIJ9 312 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 GOLGA8NF8WBI6 632 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 CTDSP2O14595 271 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 CFLARO15519 480 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 LRRTM2O43300 516 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 EMC8O43402 210 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 RGS10O43665 173 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 SLC19A2O60779 497 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 SEMA7AO75326 666 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 WISP2O76076 250 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 PDE9AO76083 593 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 GLSO94925 669 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 PSMG1O95456 288 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 STSP08842 583 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 CT45A8P0DMV1 189 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 CT45A9P0DMV2 189 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 ABOP16442 354 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 PRKCAP17252 672 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 EFNA1P20827 205 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 FPR1P21462 350 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 EPHA3P29320 983 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 IL12BP29460 328 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 CASP3P42574 277 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 FRKP42685 505 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 CDK9P50750 372 aaKnown RBP5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 DIO3P55073 304 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 C21orf58P58505 322 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 MRPS22P82650 360 aaKnown RBP5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 PRR5P85299 388 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 HTD2P86397 168 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 HSF1Q00613 529 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 PSG6Q00889 435 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 SRSF1Q07955 248 aaKnown RBP eCLIP5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 IRF3Q14653 427 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 HYAL4Q2M3T9 481 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 LSM12Q3MHD2 195 aaKnown RBP5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 SPDYE7PQ495Y7 208 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 VPS26BQ4G0F5 336 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 ZNF385BQ569K4 471 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 CT45A2Q5DJT8 189 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 CMPK2Q5EBM0 449 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 C1QL3Q5VWW1 255 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 CST9LP1Q5W188 147 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 TMEM198Q66K66 360 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 OGFOD2Q6N063 350 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 ARHGAP11AQ6P4F7 1023 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 TRAT1Q6PIZ9 186 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 CLEC18BQ6UXF7 455 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 NPSR1Q6W5P4 371 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 LARP4Q71RC2 724 aaKnown RBP eCLIP5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 SPATA19Q7Z5L4 167 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 WDR53Q7Z5U6 358 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 SPPL2CQ8IUH8 684 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 RIMKLAQ8IXN7 391 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 CPAMD8Q8IZJ3 1885 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 FAM109AQ8N4B1 249 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 TMEM251Q8N6I4 163 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 KRTCAP2Q8N6L1 136 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 ANKS4BQ8N8V4 417 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 CLEC18CQ8NCF0 446 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 PIK3C3Q8NEB9 887 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 OR52N2Q8NGI0 321 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 OR5P2Q8WZ92 322 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 HGDQ93099 445 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 DOCK10Q96BY6 2186 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 COQ8BQ96D53 544 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 TMCO6Q96DC7 493 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 SAT2Q96F10 170 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 ZNF597Q96LX8 424 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 RILPQ96NA2 401 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 DACH2Q96NX9 599 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 COL21A1Q96P44 957 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 MS4A4EQ96PG1 132 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 ADOQ96SZ5 270 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 G6PC3Q9BUM1 346 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 DUSP26Q9BV47 211 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 ANGPTL4Q9BY76 406 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 DPY30Q9C005 99 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 DEFB127Q9H1M4 99 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 CCDC134Q9H6E4 229 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 WDR55Q9H6Y2 383 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 Q9N2J8 555 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 ZFP64Q9NPA5 681 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 EQTNQ9NQ60 294 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms