RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 SESN3P58005 492 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 NCALDP61601 193 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 SLC25A3Q00325 362 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 SRSF1Q07955 248 aaKnown RBP eCLIP13.06□□□□□ -0.32
CPSF1-206ENST00000531480 FOXF1Q12946 379 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 DUSP7Q16829 419 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 SAMD4BQ5PRF9 694 aaKnown RBP13.06□□□□□ -0.32
CPSF1-206ENST00000531480 WLSQ5T9L3 541 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 RAET1LQ5VY80 246 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 ENPP6Q6UWR7 440 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 ASRGL1Q7L266 308 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 ZNF550Q7Z398 422 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 CD163Q86VB7 1156 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 ARMC8Q8IUR7 673 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 TMCO5AQ8N6Q1 288 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 RBM15BQ8NDT2 890 aaKnown RBP13.06□□□□□ -0.32
CPSF1-206ENST00000531480 GPR32P1Q8NGA4 272 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 ZPLD1Q8TCW7 415 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 TMEM234Q8WY98 164 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 UCN2Q96RP3 112 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 DMRTA2Q96SC8 542 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 TP63Q9H3D4 680 aaPredicted RBP13.06□□□□□ -0.32
CPSF1-206ENST00000531480 PIF1Q9H611 641 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 EXO5Q9H790 373 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 TAS2R1Q9NYW7 299 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 GMPR2Q9P2T1 348 aaKnown RBP13.06□□□□□ -0.32
CPSF1-206ENST00000531480 TNFRSF10DQ9UBN6 386 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 TINAGQ9UJW2 476 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 ACAD8Q9UKU7 415 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 PTPN13Q12923 2485 aa13.06□□□□□ -0.32
CPSF1-206ENST00000531480 A0A1B0GUH1 482 aa13.05□□□□□ -0.32
CPSF1-206ENST00000531480 WIPF3A6NGB9 483 aa13.05□□□□□ -0.32
CPSF1-206ENST00000531480 FIGNL2A6NMB9 653 aa13.05□□□□□ -0.32
CPSF1-206ENST00000531480 FAM47E-STBD1D6RA91 191 aa13.05□□□□□ -0.32
CPSF1-206ENST00000531480 E9PLN8 166 aa13.05□□□□□ -0.32
CPSF1-206ENST00000531480 GSC2O15499 205 aa13.05□□□□□ -0.32
CPSF1-206ENST00000531480 GMFGO60234 142 aa13.05□□□□□ -0.32
CPSF1-206ENST00000531480 LGI1O95970 557 aa13.05□□□□□ -0.32
CPSF1-206ENST00000531480 TPOP07202 933 aa13.05□□□□□ -0.32
CPSF1-206ENST00000531480 PEPDP12955 493 aa13.05□□□□□ -0.32
CPSF1-206ENST00000531480 GABRA1P14867 456 aa13.05□□□□□ -0.32
CPSF1-206ENST00000531480 NQO1P15559 274 aaKnown RBP13.05□□□□□ -0.32
CPSF1-206ENST00000531480 HTR1EP28566 365 aa13.05□□□□□ -0.32
CPSF1-206ENST00000531480 KDELR2P33947 212 aa13.05□□□□□ -0.32
CPSF1-206ENST00000531480 RAC1P63000 192 aa13.05□□□□□ -0.32
CPSF1-206ENST00000531480 RTL6Q6ICC9 239 aa13.05□□□□□ -0.32
CPSF1-206ENST00000531480 MYO7BQ6PIF6 2116 aa13.05□□□□□ -0.32
CPSF1-206ENST00000531480 GGNQ86UU5 652 aa13.05□□□□□ -0.32
CPSF1-206ENST00000531480 ULK2Q8IYT8 1036 aa13.05□□□□□ -0.32
CPSF1-206ENST00000531480 PRR7Q8TB68 274 aa13.05□□□□□ -0.32
CPSF1-206ENST00000531480 PHF10Q8WUB8 498 aaKnown RBP13.05□□□□□ -0.32
CPSF1-206ENST00000531480 RASSF5Q8WWW0 418 aa13.05□□□□□ -0.32
CPSF1-206ENST00000531480 ADGRG7Q96K78 797 aa13.05□□□□□ -0.32
CPSF1-206ENST00000531480 RNF145Q96MT1 663 aa13.05□□□□□ -0.32
CPSF1-206ENST00000531480 VKORC1Q9BQB6 163 aa13.05□□□□□ -0.32
CPSF1-206ENST00000531480 ADAM19Q9H013 955 aa13.05□□□□□ -0.32
CPSF1-206ENST00000531480 CACYBPQ9HB71 228 aaKnown RBP13.05□□□□□ -0.32
CPSF1-206ENST00000531480 MEMO1Q9Y316 297 aa13.05□□□□□ -0.32
CPSF1-206ENST00000531480 FAM215AQ9Y5M1 114 aa13.05□□□□□ -0.32
CPSF1-206ENST00000531480 SHISA8B8ZZ34 492 aa13.04□□□□□ -0.32
CPSF1-206ENST00000531480 AP3D1O14617 1153 aa13.04□□□□□ -0.32
CPSF1-206ENST00000531480 ADAMDEC1O15204 470 aa13.04□□□□□ -0.32
CPSF1-206ENST00000531480 CYP7B1O75881 506 aa13.04□□□□□ -0.32
CPSF1-206ENST00000531480 NUDT14O95848 222 aa13.04□□□□□ -0.32
CPSF1-206ENST00000531480 PRG2P13727 222 aa13.04□□□□□ -0.32
CPSF1-206ENST00000531480 IL11P20809 199 aa13.04□□□□□ -0.32
CPSF1-206ENST00000531480 ACVR2AP27037 513 aa13.04□□□□□ -0.32
CPSF1-206ENST00000531480 APOBEC1P41238 236 aaKnown RBP13.04□□□□□ -0.32
CPSF1-206ENST00000531480 SLC1A3P43003 542 aa13.04□□□□□ -0.32
CPSF1-206ENST00000531480 STARP49675 285 aa13.04□□□□□ -0.32
CPSF1-206ENST00000531480 CCR4P51679 360 aa13.04□□□□□ -0.32
CPSF1-206ENST00000531480 CASP6P55212 293 aa13.04□□□□□ -0.32
CPSF1-206ENST00000531480 NRF1Q16656 503 aa13.04□□□□□ -0.32
CPSF1-206ENST00000531480 CTU2Q2VPK5 515 aaKnown RBP13.04□□□□□ -0.32
CPSF1-206ENST00000531480 PLEKHM3Q6ZWE6 761 aa13.04□□□□□ -0.32
CPSF1-206ENST00000531480 GRINAQ7Z429 371 aa13.04□□□□□ -0.32
CPSF1-206ENST00000531480 DEFB107AQ8IZN7 70 aa13.04□□□□□ -0.32
CPSF1-206ENST00000531480 LSMEM1Q8N8F7 131 aa13.04□□□□□ -0.32
CPSF1-206ENST00000531480 OR5M1Q8NGP8 315 aa13.04□□□□□ -0.32
CPSF1-206ENST00000531480 SLC7A6OSQ96CW6 309 aaPredicted RBP13.04□□□□□ -0.32
CPSF1-206ENST00000531480 ARHGDIGQ99819 225 aa13.04□□□□□ -0.32
CPSF1-206ENST00000531480 THTPAQ9BU02 230 aa13.04□□□□□ -0.32
CPSF1-206ENST00000531480 RASSF4Q9H2L5 321 aa13.04□□□□□ -0.32
CPSF1-206ENST00000531480 MUC13Q9H3R2 512 aa13.04□□□□□ -0.32
CPSF1-206ENST00000531480 SLC5A6Q9Y289 635 aa13.04□□□□□ -0.32
CPSF1-206ENST00000531480 RRP15Q9Y3B9 282 aaKnown RBP13.04□□□□□ -0.32
CPSF1-206ENST00000531480 KIAA1549Q9HCM3 1950 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 DOPEY1Q5JWR5 2465 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 LRRK2Q5S007 2527 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 DOCK7Q96N67 2140 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 DIDO1Q9BTC0 2240 aaKnown RBP13.03□□□□□ -0.32
CPSF1-206ENST00000531480 TRGV8A0A0C4DH27 118 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 TPST2O60704 377 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 FMO6PO60774 539 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 OPN1SWP03999 348 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 FESP07332 822 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 GKN3PP0CG01 181 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 UQCRBP14927 111 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 HOXB6P17509 224 aaKnown RBP13.03□□□□□ -0.32
CPSF1-206ENST00000531480 GGT1P19440 569 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms