RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 KCNK2O95069 426 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 IFNGP01579 166 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 TSPAN19P0C672 248 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 OCM2P0CE71 109 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 OCMP0CE72 109 aaPredicted RBP5.13□□□□□ -1.59
PCF11-205ENST00000530906 HSMCR30P0CW71 290 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 S1PR1P21453 382 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 PAICSP22234 425 aaKnown RBP5.13□□□□□ -1.59
PCF11-205ENST00000530906 HOXA6P31267 233 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 GABRA5P31644 462 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 GABRA3P34903 492 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 IDUAP35475 653 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 EMDP50402 254 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 AFF3P51826 1226 aaKnown RBP5.13□□□□□ -1.59
PCF11-205ENST00000530906 ATP12AP54707 1039 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 CDH11P55287 796 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 TAS2R43P59537 309 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 DEFA1P59665 94 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 DEFA3P59666 94 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 ACTC1P68032 377 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 ACTA1P68133 377 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 SLC13A2Q13183 592 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 FGFBP1Q14512 234 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 OXA1LQ15070 435 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 OR1Q1Q15612 314 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 TRAM1Q15629 374 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 GPR68Q15743 365 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 TSTQ16762 297 aaKnown RBP5.13□□□□□ -1.59
PCF11-205ENST00000530906 ISXQ2M1V0 245 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 TRIM16LQ309B1 348 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 AMZ1Q400G9 498 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 PLK5Q496M5 336 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 TRMT12Q53H54 448 aaKnown RBP5.13□□□□□ -1.59
PCF11-205ENST00000530906 WIPI1Q5MNZ9 446 aaPredicted RBP5.13□□□□□ -1.59
PCF11-205ENST00000530906 LCE5AQ5TCM9 118 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 ACSM5Q6NUN0 579 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 ARHGAP11AQ6P4F7 1023 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 ULK3Q6PHR2 472 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 CD200R1LQ6Q8B3 271 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 TMPRSS11AQ6ZMR5 421 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 TTLL10Q6ZVT0 673 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 PRSS42Q7Z5A4 293 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 C11orf74Q86VG3 221 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 KIF18BQ86Y91 864 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 PLXDC1Q8IUK5 500 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 PHC2Q8IXK0 858 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 NRMQ8IXM6 262 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 GPALPP1Q8IXQ4 340 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 NLGN4XQ8N0W4 816 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 CLIP4Q8N3C7 705 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 DRAXINQ8NBI3 349 aaPredicted RBP5.13□□□□□ -1.59
PCF11-205ENST00000530906 OR52R1Q8NGF1 315 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 OR52I1Q8NGK6 324 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 OR9A4Q8NGU2 314 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 FANK1Q8TC84 345 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 HAVCR2Q8TDQ0 301 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 LMX1AQ8TE12 382 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 DNASE2BQ8WZ79 361 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 AP3S1Q92572 193 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 UFD1Q92890 307 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 RPL3LQ92901 407 aaKnown RBP5.13□□□□□ -1.59
PCF11-205ENST00000530906 CLDN23Q96B33 292 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 BPIFA2Q96DR5 249 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 HSPBAP1Q96EW2 488 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 RNFT2Q96EX2 444 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 MRPL48Q96GC5 212 aaKnown RBP5.13□□□□□ -1.59
PCF11-205ENST00000530906 CCDC120Q96HB5 630 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 SLC46A1Q96NT5 459 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 WDFY2Q96P53 400 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 OR5M11Q96RB7 305 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 DPYSL5Q9BPU6 564 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 PRSS27Q9BQR3 290 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 WFDC6Q9BQY6 131 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 CHCHD6Q9BRQ6 235 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 CCDC32Q9BV29 185 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 CDADC1Q9BWV3 514 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 QRSL1Q9H0R6 528 aaKnown RBP5.13□□□□□ -1.59
PCF11-205ENST00000530906 TTYH1Q9H313 450 aaPredicted RBP5.13□□□□□ -1.59
PCF11-205ENST00000530906 UBQLN3Q9H347 655 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 TCEAL2Q9H3H9 227 aaPredicted RBP5.13□□□□□ -1.59
PCF11-205ENST00000530906 SP140LQ9H930 580 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 C12orf10Q9HB07 376 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 CPNE5Q9HCH3 593 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 HHATLQ9HCP6 504 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 EXOSC3Q9NQT5 275 aaKnown RBP5.13□□□□□ -1.59
PCF11-205ENST00000530906 ASB6Q9NWX5 421 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 SIDT1Q9NXL6 827 aaKnown RBP5.13□□□□□ -1.59
PCF11-205ENST00000530906 GALNT8Q9NY28 637 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 HAO2Q9NYQ3 351 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 SLC7A7Q9UM01 511 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 POLHQ9Y253 713 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 TRAPPC4Q9Y296 219 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 GSTK1Q9Y2Q3 226 aa5.13□□□□□ -1.59
PCF11-205ENST00000530906 GPR55Q9Y2T6 319 aaPredicted RBP5.13□□□□□ -1.59
PCF11-205ENST00000530906 MRPS2Q9Y399 296 aaKnown RBP5.13□□□□□ -1.59
PCF11-205ENST00000530906 GOLGA4Q13439 2230 aaKnown RBP5.13□□□□□ -1.59
PCF11-205ENST00000530906 COL5A1P20908 1838 aaPredicted RBP5.12□□□□□ -1.59
PCF11-205ENST00000530906 A0A0A6YYC8 382 aaPredicted RBP5.12□□□□□ -1.59
PCF11-205ENST00000530906 LOC100506127A0A0U1RQW1 187 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 A0A1B0GVG6 124 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms