RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 FCRL2Q96LA5 508 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-214ENST00000530886 ZFP3Q96NJ6 502 aa7.56□□□□□ -1.2
CSDE1-214ENST00000530886 NRIP2Q9BQI9 281 aa7.56□□□□□ -1.2
CSDE1-214ENST00000530886 WRAP53Q9BUR4 548 aaKnown RBP7.56□□□□□ -1.2
CSDE1-214ENST00000530886 WDR13Q9H1Z4 485 aa7.56□□□□□ -1.2
CSDE1-214ENST00000530886 NMRK2Q9NPI5 230 aa7.56□□□□□ -1.2
CSDE1-214ENST00000530886 C19orf12Q9NSK7 152 aa7.56□□□□□ -1.2
CSDE1-214ENST00000530886 TMEM248Q9NWD8 314 aa7.56□□□□□ -1.2
CSDE1-214ENST00000530886 PARPBPQ9NWS1 579 aa7.56□□□□□ -1.2
CSDE1-214ENST00000530886 GULP1Q9UBP9 304 aa7.56□□□□□ -1.2
CSDE1-214ENST00000530886 RUVBL1Q9Y265 456 aaKnown RBP7.56□□□□□ -1.2
CSDE1-214ENST00000530886 DNAJC25-GNG10A0A024R161 153 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 GSAPA4D1B5 854 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 PRAMEF4O60810 478 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 FGF19O95750 216 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 SLC6A11P48066 632 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 C2orf68Q2NKX9 166 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 SLC25A35Q3KQZ1 300 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 CPTPQ5TA50 214 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 PRAMEF9Q5VWM5 478 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 TCTN3Q6NUS6 607 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 DRAM2Q6UX65 266 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 CARFQ8N187 725 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 BRIX1Q8TDN6 353 aaKnown RBP7.55□□□□□ -1.2
CSDE1-214ENST00000530886 HMCESQ96FZ2 354 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 ASB16Q96NS5 453 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 KLHL5Q96PQ7 755 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 C1orf198Q9H425 327 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 RHCGQ9UBD6 479 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 PISDQ9UG56 409 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 MYBPHLA2RUH7 354 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 BTBD17A6NE02 478 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 MARCH11A6NNE9 402 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 F8VVB4 439 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 F8VWA3 439 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 CLDN11O75508 207 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 MELTFP08582 738 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 RHOQP17081 205 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 GDF5P43026 501 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 CRATP43155 626 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 CASP6P55212 293 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 NFATC2Q13469 925 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 DCAF12L2Q5VW00 463 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 HEPHL1Q6MZM0 1159 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 CDC73Q6P1J9 531 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 ZNF546Q86UE3 836 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 ZBTB2Q8N680 514 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 ZNF511Q8NB15 262 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 C15orf40Q8WUR7 153 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 RAB24Q969Q5 203 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 MGME1Q9BQP7 344 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 NAA11Q9BSU3 229 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-214ENST00000530886 TRMT61BQ9BVS5 477 aaKnown RBP7.55□□□□□ -1.2
CSDE1-214ENST00000530886 SMG9Q9H0W8 520 aaKnown RBP7.55□□□□□ -1.2
CSDE1-214ENST00000530886 SEMA6CQ9H3T2 930 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 KLHL31Q9H511 634 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 SFXN1Q9H9B4 322 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 ASF1BQ9NVP2 202 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 C2orf42Q9NWW7 574 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 FBXL4Q9UKA2 621 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 G3V3G9 751 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 RPL36A-HNRNPH2H7BZ11 118 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 TNFRSF10BO14763 440 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 B4GALT3O60512 393 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 CNMDO75829 334 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 PTBP3O95758 552 aaKnown RBP7.55□□□□□ -1.2
CSDE1-214ENST00000530886 TRBC1P01850 177 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 HEXBP07686 556 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 SBK2P0C263 348 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 HKR1P10072 659 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 ZNF14P17017 642 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-214ENST00000530886 DGKAP23743 735 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 HTR1FP30939 366 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 LUMP51884 338 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-214ENST00000530886 SORDQ00796 357 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 NAAAQ02083 359 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 SEMG2Q02383 582 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 PJVKQ0ZLH3 352 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 HNF4GQ14541 408 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 MFSD14CQ5VZR4 134 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 OR52W1Q6IF63 320 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 LBX2Q6XYB7 198 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 CXXC5Q7LFL8 322 aaKnown RBP7.55□□□□□ -1.2
CSDE1-214ENST00000530886 CELF5Q8N6W0 485 aaKnown RBP7.55□□□□□ -1.2
CSDE1-214ENST00000530886 C14orf79Q96F83 325 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 GINS4Q9BRT9 223 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 C16orf70Q9BSU1 422 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 SUV39H2Q9H5I1 410 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 TMEM27Q9HBJ8 222 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 ADARB2Q9NS39 739 aaKnown RBP7.55□□□□□ -1.2
CSDE1-214ENST00000530886 OR10H1Q9Y4A9 318 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 PCDHGC4Q9Y5F7 938 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 PCDHGA1Q9Y5H4 931 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 TIMM10BQ9Y5J6 103 aa7.55□□□□□ -1.2
CSDE1-214ENST00000530886 DOCK6Q96HP0 2047 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 POLR2AP24928 1970 aaKnown RBP7.54□□□□□ -1.2
CSDE1-214ENST00000530886 TBC1D3DA0A087WVF3 549 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 TBC1D3IA0A087WXS9 549 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 TBC1D3EA0A087X179 549 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 TBC1D3KA0A087X1G2 549 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms