RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 FFAR4Q5NUL3 377 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 PTRHD1Q6GMV3 140 aaKnown RBP6.03□□□□□ -1.44
CSDE1-213ENST00000530784 PRMT9Q6P2P2 845 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 CORO6Q6QEF8 472 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 FIGLAQ6QHK4 219 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 ISLR2Q6UXK2 745 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 ZNF497Q6ZNH5 498 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 PEX26Q7Z412 305 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 SYCE1Q8N0S2 351 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 BCORP1Q8N888 145 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 OR11G2Q8NGC1 345 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 OR4L1Q8NH43 312 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 LKAAEAR1Q8TD35 194 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 SKA2Q8WVK7 121 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-213ENST00000530784 RAD51AP1Q96B01 352 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 MOCOSQ96EN8 888 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 ZNF285Q96NJ3 590 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 PANX3Q96QZ0 392 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 ASCL2Q99929 193 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 CARD6Q9BX69 1037 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 ZNF160Q9HCG1 818 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 CHMP1AQ9HD42 196 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-213ENST00000530784 OLAHQ9NV23 265 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 ZNF282Q9UDV7 671 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-213ENST00000530784 SLC2A6Q9UGQ3 507 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 ANAPC5Q9UJX4 755 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 ENTPD4Q9Y227 616 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 SHANK1Q9Y566 2161 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 MYO9AB2RTY4 2548 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 NBASA2RRP1 2371 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 IGKV3D-15A0A087WSY6 115 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 NSG1A0A0A6YYJ2 146 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 A0A0J9YVX5 310 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 A0A1B0GU03 582 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 VSTM2BA6NLU5 285 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 PRMT5O14744 637 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-213ENST00000530784 AVILO75366 819 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 SLCO2B1O94956 709 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 NADKO95544 446 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-213ENST00000530784 CLPTM1O96005 669 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 IFNB1P01574 187 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 STSP08842 583 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 PSMB5P28074 263 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 FDFT1P37268 417 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 BDKRB1P46663 353 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 TTPAP49638 278 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 INAQ16352 499 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 FRMPD2BQ6IN97 320 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 RPUSD3Q6P087 351 aaKnown RBP6.02□□□□□ -1.45
CSDE1-213ENST00000530784 CNSTQ6PJW8 725 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 KIAA1328Q86T90 577 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 LDB1Q86U70 411 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-213ENST00000530784 PRSS58Q8IYP2 241 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 KRT222Q8N1A0 295 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 ZNF485Q8NCK3 441 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 MCUQ8NE86 351 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 CATSPER1Q8NEC5 780 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 OR2L3Q8NG85 312 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 PEX13Q92968 403 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 C8orf44Q96CB5 159 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 CABS1Q96KC9 395 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 PANX2Q96RD6 677 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 SPATA7Q9P0W8 599 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 RHCGQ9UBD6 479 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 GNPTGQ9UJJ9 305 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 C3orf18Q9UK00 162 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 PACSIN2Q9UNF0 486 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-213ENST00000530784 RUVBL2Q9Y230 463 aaKnown RBP6.02□□□□□ -1.45
CSDE1-213ENST00000530784 MRPS28Q9Y2Q9 187 aaKnown RBP6.02□□□□□ -1.45
CSDE1-213ENST00000530784 SNX8Q9Y5X2 465 aa6.02□□□□□ -1.45
CSDE1-213ENST00000530784 SPTAN1Q13813 2472 aaKnown RBP6.02□□□□□ -1.45
CSDE1-213ENST00000530784 IGLV3-12A0A075B6K2 115 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 TRAV17A0A0B4J275 112 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 IDSB3KWA1 339 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 VPS26AO75436 327 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 C1orf105O95561 183 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 SERPINA7P05543 415 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 APRTP07741 180 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 COX6A1P12074 109 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 CXCR2P25025 360 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 ELAVL4P26378 380 aaKnown RBP6.01□□□□□ -1.45
CSDE1-213ENST00000530784 CMPK1P30085 196 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 STIP1P31948 543 aaKnown RBP6.01□□□□□ -1.45
CSDE1-213ENST00000530784 CEACAM8P31997 349 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-213ENST00000530784 GRIA1P42261 906 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 TNFSF10P50591 281 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 PNRC1Q12796 327 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-213ENST00000530784 TMEM187Q14656 261 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 PCLAFQ15004 111 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 CCSMST1Q4G0I0 132 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 VWA2Q5GFL6 755 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 NDUFAF7Q7L592 441 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 OTOAQ7RTW8 1153 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 LRRC6Q86X45 466 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 OTUD6BQ8N6M0 293 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 CCDC89Q8N998 374 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 OR2A1Q8NGT9 310 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 C10orf90Q96M02 699 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 FOPNLQ96NB1 174 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 NUDT16L1Q9BRJ7 211 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms