RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 IGHV2-70DA0A0C4DH43 119 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 ZNF716A6NP11 495 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 PP2D1A8MPX8 630 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 CASC3O15234 703 aaKnown RBP3.44□□□□□ -1.86
C11orf88-204ENST00000529661 GPAA1O43292 621 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 B4GALT2O60909 372 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 SLITRK3O94933 977 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 DUSP14O95147 198 aaKnown RBP3.44□□□□□ -1.86
C11orf88-204ENST00000529661 ZNF735P0CB33 412 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 PNMTP11086 282 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 CCDC130P13994 396 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 CYP2B6P20813 491 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 SERPINA2P20848 420 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 PTBP1P26599 531 aaKnown RBP eCLIP3.44□□□□□ -1.86
C11orf88-204ENST00000529661 LAP3P28838 519 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 CCR1P32246 355 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 P2RY1P47900 373 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 STARP49675 285 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 PRRX1P54821 245 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 CXCL6P80162 114 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 ASAH1Q13510 395 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 GANABQ14697 944 aaKnown RBP3.44□□□□□ -1.86
C11orf88-204ENST00000529661 TGIF1Q15583 401 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 EXOC3L2Q2M3D2 409 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 TIMM50Q3ZCQ8 353 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 GLYR1Q49A26 553 aaPredicted RBP3.44□□□□□ -1.86
C11orf88-204ENST00000529661 RNLSQ5VYX0 342 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 CGB2Q6NT52 195 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 PMF1Q6P1K2 205 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 C2orf66Q6UXQ4 117 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 C16orf62Q7Z3J2 963 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 MOB3BQ86TA1 216 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 ZNF584Q8IVC4 421 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 KIR3DL3Q8N743 410 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 BHLHE23Q8NDY6 225 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 STXBP6Q8NFX7 210 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 PKIBQ9C010 78 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 GLT8D2Q9H1C3 349 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 CAB39LQ9H9S4 337 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 FANCEQ9HB96 536 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 SIGLEC8Q9NYZ4 499 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 SPRR3Q9UBC9 169 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 RIMS3Q9UJD0 308 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 PSME2Q9UL46 239 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 RASD1Q9Y272 281 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 GON4LQ3T8J9 2241 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 GOLGA6L7A0A1B0GV03 622 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 A0A1W2PQ72 361 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 TAPBPO15533 448 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 RS1O15537 224 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 UGT2B17O75795 530 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 CIB2O75838 187 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 IL1BP01584 269 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 IGKV3-15P01624 115 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 SLC35E2P0CK97 266 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 GCFC2P16383 781 aaKnown RBP3.43□□□□□ -1.86
C11orf88-204ENST00000529661 MMP11P24347 488 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 FASP25445 335 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 IL2RGP31785 369 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 CD80P33681 288 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 NF2P35240 595 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 GRIA1P42261 906 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 SLC25A1P53007 311 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 RPL32P62910 135 aaKnown RBP3.43□□□□□ -1.86
C11orf88-204ENST00000529661 SERTAD2Q14140 314 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 DPYSL2Q16555 572 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 PAN3Q58A45 887 aaKnown RBP3.43□□□□□ -1.86
C11orf88-204ENST00000529661 NLRP9Q7RTR0 991 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 MCOLN2Q8IZK6 566 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 TTC5Q8N0Z6 440 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 TMEM123Q8N131 208 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 GPR137CQ8N3F9 429 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 OR1F12Q8NHA8 337 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 AKR7LQ8NHP1 331 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 OR5M11Q96RB7 305 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 TMEM43Q9BTV4 400 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 CRNKL1Q9BZJ0 848 aaKnown RBP3.43□□□□□ -1.86
C11orf88-204ENST00000529661 GPR61Q9BZJ8 451 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 YY1AP1Q9H869 796 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 FN3KRPQ9HA64 309 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 RAB18Q9NP72 206 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 SMOXQ9NWM0 555 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 PAK1IP1Q9NWT1 392 aaPredicted RBP3.43□□□□□ -1.86
C11orf88-204ENST00000529661 HYPKQ9NX55 129 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 ANGPTL2Q9UKU9 493 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 ERVW-1Q9UQF0 538 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 TRAF3IP3Q9Y228 551 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 ALG6Q9Y672 507 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 MAD1L1Q9Y6D9 718 aa3.43□□□□□ -1.86
C11orf88-204ENST00000529661 KANK1Q14678 1352 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 LOC100131303A0A0U1RQF7 123 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 GOLGA8OA6NCC3 632 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 B4DXG7 233 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 GOLGA8NF8WBI6 632 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 M0QX08 132 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 FCN1O00602 326 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 PHOX2AO14813 284 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 MED7O43513 233 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 RPL29P47914 159 aaKnown RBP3.42□□□□□ -1.86
C11orf88-204ENST00000529661 CEBPDP49716 269 aaPredicted RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms