RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 PRR23D2P0DMB1 279 aaPredicted RBP13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 UBL4AP11441 157 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 CKMT1AP12532 417 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 PEPDP12955 493 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 ATP6V1E1P36543 226 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 ETV5P41161 510 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 ETV1P50549 477 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 PNLIPRP2P54317 469 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 BDH1Q02338 343 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 SRSF5Q13243 272 aaKnown RBP13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 SSX1Q16384 188 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 ISXQ2M1V0 245 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 ARHGAP11AQ6P4F7 1023 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 CPOQ8IVL8 374 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 CADM2Q8N3J6 435 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 KLHL36Q8N4N3 616 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 FNDC8Q8TC99 324 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 TSLPQ969D9 159 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 TP53INP1Q96A56 240 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 TMEM43Q9BTV4 400 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 NDEL1Q9GZM8 345 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 NXF5Q9H1B4 397 aaKnown RBP13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 LRRN3Q9H3W5 708 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 PRDM6Q9NQX0 595 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 TNFRSF10DQ9UBN6 386 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 KLHL21Q9UJP4 597 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 RARRES3Q9UL19 164 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 GPR52Q9Y2T5 361 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 PEX16Q9Y5Y5 336 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 CABIN1Q9Y6J0 2220 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 PI4KAP42356 2102 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 XIRP2A4UGR9 3374 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 CPED1A4D0V7 1026 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 A8MUA0 341 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 SIGLEC6O43699 453 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 NDUFB2O95178 105 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 NTN1O95631 604 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 CH25HO95992 272 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 GAAP10253 952 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 CD40LGP29965 261 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 S100A5P33763 92 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 OPRL1P41146 370 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 MLLT10P55197 1068 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 FXYD6P3P58550 94 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 PRPS1P60891 318 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 POU4F2Q12837 409 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 GPR50Q13585 617 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 COL9A2Q14055 689 aaPredicted RBP13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 EBPQ15125 230 aaKnown RBP13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 KIRREL2Q6UWL6 708 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 TMPRSS11AQ6ZMR5 421 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 PHC2Q8IXK0 858 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 TMCO5AQ8N6Q1 288 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 MAFAQ8NHW3 353 aaPredicted RBP13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 LIPHQ8WWY8 451 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 PIGKQ92643 395 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 UFD1Q92890 307 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 ARHGAP9Q9BRR9 750 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 NUDT9Q9BW91 350 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 VN1R1Q9GZP7 353 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 ZBTB20Q9HC78 741 aaPredicted RBP13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 HINT3Q9NQE9 182 aaKnown RBP13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 HAO2Q9NYQ3 351 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 CRNNQ9UBG3 495 aaPredicted RBP13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 MKL2Q9ULH7 1088 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 ZNF337Q9Y3M9 751 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 SEC16AO15027 2179 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 A0A075B6Q4 140 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 PNMA8CA0A1B0GUJ8 204 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 KPNA4O00629 521 aaPredicted RBP13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 REM1O75628 298 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 CER1O95813 267 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 ZNF3P17036 446 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 GALP22466 123 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 IL12BP29460 328 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 SLC1A3P43003 542 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 CCL7P80098 99 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 CSTF1Q05048 431 aaKnown RBP13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 CRYZQ08257 329 aaKnown RBP13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 VWA2Q5GFL6 755 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 ZNF574Q6ZN55 896 aaPredicted RBP13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 DPY19L2P2Q6ZN68 376 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 GATAD2AQ86YP4 633 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 OR13C2Q8NGS9 318 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 C3orf49Q96BT1 292 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 EFHD2Q96C19 240 aaPredicted RBP13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 CLIP3Q96DZ5 547 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 CENPOQ9BU64 300 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 CAB39Q9Y376 341 aaPredicted RBP13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 PCDHGB6Q9Y5F9 930 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 PMF1-BGLAPU3KQ54 211 aa13.56□□□□□ -0.24
ECHDC1-220ENST00000528402 ADAMTS20P59510 1910 aa13.55□□□□□ -0.24
ECHDC1-220ENST00000528402 RP1P56715 2156 aa13.55□□□□□ -0.24
ECHDC1-220ENST00000528402 TNRC18O15417 2968 aaPredicted RBP13.55□□□□□ -0.24
ECHDC1-220ENST00000528402 LY6G6EA0A0G2JKS1 128 aa13.55□□□□□ -0.24
ECHDC1-220ENST00000528402 SAGE2PA6NJ88 616 aa13.55□□□□□ -0.24
ECHDC1-220ENST00000528402 ELOA3DA6NLF2 546 aaPredicted RBP13.55□□□□□ -0.24
ECHDC1-220ENST00000528402 ZNF670-ZNF695F2Z2N8 137 aa13.55□□□□□ -0.24
ECHDC1-220ENST00000528402 SLC30A4O14863 429 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms