RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 MPLP40238 635 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 RANBP1P43487 201 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 GABRA4P48169 554 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 CDK9P50750 372 aaKnown RBP3.86□□□□□ -1.79
CD44-226ENST00000527889 ANXA11P50995 505 aaKnown RBP3.86□□□□□ -1.79
CD44-226ENST00000527889 GZMMP51124 257 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 NCBP2P52298 156 aaKnown RBP eCLIP3.86□□□□□ -1.79
CD44-226ENST00000527889 HNRNPFP52597 415 aaKnown RBP3.86□□□□□ -1.79
CD44-226ENST00000527889 LIM2P55344 173 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 RAC3P60763 192 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 TRA2BP62995 288 aaKnown RBP3.86□□□□□ -1.79
CD44-226ENST00000527889 CCL7P80098 99 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 SIM1P81133 766 aaPredicted RBP3.86□□□□□ -1.79
CD44-226ENST00000527889 SHC2P98077 582 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 TNFRSF17Q02223 184 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 RELAQ04206 551 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 ABHD18Q0P651 414 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 BNIP2Q12982 314 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 HSPB3Q12988 150 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 RUNX2Q13950 521 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 C16orf72Q14CZ0 275 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 HEPACAMQ14CZ8 416 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 LTB4RQ15722 352 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 ADIPOQQ15848 244 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 CYP51A1Q16850 503 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 SYT16Q17RD7 645 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 ZNF528Q3MIS6 628 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 AARDQ4LEZ3 155 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 LRRC23Q53EV4 343 aaPredicted RBP3.86□□□□□ -1.79
CD44-226ENST00000527889 GLYATQ6IB77 296 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 OR7E24Q6IFN5 339 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 LCN8Q6JVE9 175 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 PET117Q6UWS5 81 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 MEX3BQ6ZN04 569 aaKnown RBP3.86□□□□□ -1.79
CD44-226ENST00000527889 ABHD13Q7L211 337 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 PIWIL3Q7Z3Z3 882 aaKnown RBP3.86□□□□□ -1.79
CD44-226ENST00000527889 SZRD1Q7Z422 152 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 SPRED1Q7Z699 444 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 GALNT10Q86SR1 603 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 CALHM3Q86XJ0 350 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 RNF130Q86XS8 419 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 GRAMD2AQ8IUY3 354 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 OR4N5Q8IXE1 308 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 MICU2Q8IYU8 434 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 CARFQ8N187 725 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 CA13Q8N1Q1 262 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 ZCCHC7Q8N3Z6 543 aaKnown RBP3.86□□□□□ -1.79
CD44-226ENST00000527889 FAM109AQ8N4B1 249 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 METTL25Q8N6Q8 603 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 C11orf44Q8N8P7 122 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 OR2T12Q8NG77 320 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 OR10Q1Q8NGQ4 319 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 OR9A4Q8NGU2 314 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 OR4C6Q8NH72 309 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 SAP25Q8TEE9 199 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 ZFP90Q8TF47 636 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 FIG4Q92562 907 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 PTP4A1Q93096 173 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 FAM162AQ96A26 154 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 SLCO4A1Q96BD0 722 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 MTERF3Q96E29 417 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 FAM120BQ96EK7 910 aaKnown RBP3.86□□□□□ -1.79
CD44-226ENST00000527889 CNRIP1Q96F85 164 aaPredicted RBP3.86□□□□□ -1.79
CD44-226ENST00000527889 SMIM10Q96HG1 83 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 REXO5Q96IC2 774 aaKnown RBP3.86□□□□□ -1.79
CD44-226ENST00000527889 MAGED4Q96JG8 741 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 NSMCE2Q96MF7 247 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 BBS4Q96RK4 519 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 SEPHS2Q99611 448 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 BCL7BQ9BQE9 202 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 FAIM2Q9BWQ8 316 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 NLNQ9BYT8 704 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 SPRTNQ9H040 489 aaPredicted RBP3.86□□□□□ -1.79
CD44-226ENST00000527889 SLC25A18Q9H1K4 315 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 GLIPR2Q9H4G4 154 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 RPF2Q9H7B2 306 aaKnown RBP3.86□□□□□ -1.79
CD44-226ENST00000527889 KAT8Q9H7Z6 458 aaKnown RBP3.86□□□□□ -1.79
CD44-226ENST00000527889 GORASP2Q9H8Y8 452 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 MSL2Q9HCI7 577 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 SLC35C2Q9NQQ7 365 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 SIRT3Q9NTG7 399 aaPredicted RBP3.86□□□□□ -1.79
CD44-226ENST00000527889 SLC39A1Q9NY26 324 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 TAS2R10Q9NYW0 307 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 NLGN3Q9NZ94 848 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 EHD3Q9NZN3 535 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 HCN3Q9P1Z3 774 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 STX18Q9P2W9 335 aaKnown RBP3.86□□□□□ -1.79
CD44-226ENST00000527889 SLC25A10Q9UBX3 287 aaPredicted RBP3.86□□□□□ -1.79
CD44-226ENST00000527889 ZNF282Q9UDV7 671 aaPredicted RBP3.86□□□□□ -1.79
CD44-226ENST00000527889 EPHA6Q9UF33 1036 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 UTS2RQ9UKP6 389 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 CES1P1Q9UKY3 287 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 OAZ3Q9UMX2 235 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 WBP11Q9Y2W2 641 aaKnown RBP3.86□□□□□ -1.79
CD44-226ENST00000527889 NAALAD2Q9Y3Q0 740 aa3.86□□□□□ -1.79
CD44-226ENST00000527889 MN1Q10571 1320 aaPredicted RBP3.86□□□□□ -1.79
CD44-226ENST00000527889 HEATR1Q9H583 2144 aaKnown RBP3.86□□□□□ -1.79
CD44-226ENST00000527889 INTS1Q8N201 2190 aaKnown RBP3.86□□□□□ -1.79
CD44-226ENST00000527889 COL12A1Q99715 3063 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 A0A0A6YYC8 382 aaPredicted RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms