RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 A0A1W2PR80 420 aa10.77□□□□□ -0.69
SRPRA-202ENST00000527817 TRIM49D1C9J1S8 452 aa10.77□□□□□ -0.69
SRPRA-202ENST00000527817 KCNAB3O43448 404 aa10.77□□□□□ -0.69
SRPRA-202ENST00000527817 EIF4E2O60573 245 aaKnown RBP10.77□□□□□ -0.69
SRPRA-202ENST00000527817 ATP5F1P24539 256 aaPredicted RBP10.77□□□□□ -0.69
SRPRA-202ENST00000527817 NTF4P34130 210 aa10.77□□□□□ -0.69
SRPRA-202ENST00000527817 COMPP49747 757 aaPredicted RBP10.77□□□□□ -0.69
SRPRA-202ENST00000527817 KIAA0040Q15053 153 aa10.77□□□□□ -0.69
SRPRA-202ENST00000527817 IMPG1Q17R60 797 aa10.77□□□□□ -0.69
SRPRA-202ENST00000527817 RELL1Q8IUW5 271 aa10.77□□□□□ -0.69
SRPRA-202ENST00000527817 SLC22A9Q8IVM8 553 aa10.77□□□□□ -0.69
SRPRA-202ENST00000527817 FBXO30Q8TB52 745 aa10.77□□□□□ -0.69
SRPRA-202ENST00000527817 CIDECQ96AQ7 238 aaPredicted RBP10.77□□□□□ -0.69
SRPRA-202ENST00000527817 APH1AQ96BI3 265 aa10.77□□□□□ -0.69
SRPRA-202ENST00000527817 ZMYND19Q96E35 227 aaPredicted RBP10.77□□□□□ -0.69
SRPRA-202ENST00000527817 FBXO17Q96EF6 278 aa10.77□□□□□ -0.69
SRPRA-202ENST00000527817 L3HYPDHQ96EM0 354 aa10.77□□□□□ -0.69
SRPRA-202ENST00000527817 SORCS2Q96PQ0 1159 aa10.77□□□□□ -0.69
SRPRA-202ENST00000527817 OR5B2Q96R09 309 aa10.77□□□□□ -0.69
SRPRA-202ENST00000527817 STACQ99469 402 aa10.77□□□□□ -0.69
SRPRA-202ENST00000527817 PAFAH2Q99487 392 aa10.77□□□□□ -0.69
SRPRA-202ENST00000527817 SOX7Q9BT81 388 aa10.77□□□□□ -0.69
SRPRA-202ENST00000527817 TRMOQ9BU70 441 aa10.77□□□□□ -0.69
SRPRA-202ENST00000527817 C1QTNF6Q9BXI9 259 aa10.77□□□□□ -0.69
SRPRA-202ENST00000527817 BHLHE41Q9C0J9 482 aaPredicted RBP10.77□□□□□ -0.69
SRPRA-202ENST00000527817 PIGUQ9H490 435 aa10.77□□□□□ -0.69
SRPRA-202ENST00000527817 ZDHHC18Q9NUE0 388 aa10.77□□□□□ -0.69
SRPRA-202ENST00000527817 NINJ2Q9NZG7 142 aa10.77□□□□□ -0.69
SRPRA-202ENST00000527817 ZNF180Q9UJW8 692 aa10.77□□□□□ -0.69
SRPRA-202ENST00000527817 NOSIPQ9Y314 301 aaKnown RBP10.77□□□□□ -0.69
SRPRA-202ENST00000527817 ESPNB1AK53 854 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 NPIPB8E9PQR5 432 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 PDLIM1O00151 329 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 GPR171O14626 319 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 DNAJA2O60884 412 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 RSL1D1O76021 490 aaKnown RBP10.76□□□□□ -0.69
SRPRA-202ENST00000527817 H6PDO95479 791 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 IGHV3-9P01782 118 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 ATP6V1C1P21283 382 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 SRP14P37108 136 aaKnown RBP10.76□□□□□ -0.69
SRPRA-202ENST00000527817 DIO1P49895 249 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 ATP12AP54707 1039 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 FOXA1P55317 472 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 CSNK2A1P68400 391 aaPredicted RBP10.76□□□□□ -0.69
SRPRA-202ENST00000527817 C2orf54Q08AI8 447 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 ZSWIM7Q19AV6 140 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 FAM174BQ3ZCQ3 159 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 ZNF385BQ569K4 471 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 ABLIM2Q6H8Q1 611 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 C3orf33Q6P1S2 294 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 OR5W2Q8NH69 310 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 DCAKDQ8WVC6 231 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 HPS1Q92902 700 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 REEP4Q9H6H4 257 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 ANKZF1Q9H8Y5 726 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 RRAGDQ9NQL2 400 aaPredicted RBP10.76□□□□□ -0.69
SRPRA-202ENST00000527817 SERINC1Q9NRX5 453 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 TMEM216Q9P0N5 145 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 MALT1Q9UDY8 824 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 AMDHD2Q9Y303 409 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 DTNAQ9Y4J8 743 aa10.76□□□□□ -0.69
SRPRA-202ENST00000527817 NUP214P35658 2090 aaPredicted RBP10.76□□□□□ -0.69
SRPRA-202ENST00000527817 ZNF716A6NP11 495 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 NPIPB9F8W1W9 429 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 SULT2B1O00204 365 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 MRPL33O75394 65 aaKnown RBP10.75□□□□□ -0.69
SRPRA-202ENST00000527817 SEC22BO75396 215 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 ITGA5P08648 1049 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 SNRPAP09012 282 aaKnown RBP10.75□□□□□ -0.69
SRPRA-202ENST00000527817 TACSTD2P09758 323 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 PRPH2P23942 346 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 GIFP27352 417 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 FOXG1P55316 489 aaPredicted RBP10.75□□□□□ -0.69
SRPRA-202ENST00000527817 CBFBQ13951 182 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 QPRTQ15274 297 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 CARTPTQ16568 116 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 TIGD2Q4W5G0 525 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.75□□□□□ -0.69
SRPRA-202ENST00000527817 ANKRD26P1Q6NSI1 321 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 DEF8Q6ZN54 512 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 TIFABQ6ZNK6 161 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 SZRD1Q7Z422 152 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 LCA5Q86VQ0 697 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 C17orf78Q8N4C9 275 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 LINC01356Q8N9X3 169 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 TOR1AIP2Q8NFQ8 470 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 CDS1Q92903 461 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 PPCDCQ96CD2 204 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 FAM120BQ96EK7 910 aaKnown RBP10.75□□□□□ -0.69
SRPRA-202ENST00000527817 OTUB1Q96FW1 271 aaPredicted RBP10.75□□□□□ -0.69
SRPRA-202ENST00000527817 BPESC1Q9GZL8 116 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 GSTO2Q9H4Y5 243 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 MID1IP1Q9NPA3 183 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 SLC17A5Q9NRA2 495 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 SH3BP4Q9P0V3 963 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 METRNQ9UJH8 293 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 DCTN4Q9UJW0 460 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 TRAF6Q9Y4K3 522 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 CCL27Q9Y4X3 112 aa10.75□□□□□ -0.69
SRPRA-202ENST00000527817 NPIPA5A0A0B4J1W7 369 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms