RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 ACTR3BQ9P1U1 418 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 B4GALT7Q9UBV7 327 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 SLC7A8Q9UHI5 535 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 OSGIN1Q9UJX0 560 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 A0A0J9YW62 118 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 NPIPA2E9PIF3 369 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 NPIPA3F8WFD2 350 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 EBAG9O00559 213 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 FFAR1O14842 300 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 DNAJC8O75937 253 aaPredicted RBP9.71□□□□□ -0.86
NEDD8-205ENST00000527046 ATP5HO75947 161 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 PRKD3O94806 890 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 SERPINA1P01009 418 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 OPN1LWP04000 364 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 CPN1P15169 458 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 ZNF708P17019 499 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 PGCP20142 388 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 GNLYP22749 145 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 ADH6P28332 368 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 EGR4Q05215 589 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 TOMM20Q15388 145 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 BCL2A1Q16548 175 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 C3AR1Q16581 482 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 LRRC23Q53EV4 343 aaPredicted RBP9.71□□□□□ -0.86
NEDD8-205ENST00000527046 C1QL3Q5VWW1 255 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 LCN8Q6JVE9 175 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 PLXDC2Q6UX71 529 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 SEM1Q6ZVN7 128 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 PRICKLE2Q7Z3G6 844 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 ADGRE4PQ86SQ3 457 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 DOLPP1Q86YN1 238 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 ZNF440Q8IYI8 595 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 RPRMLQ8N4K4 120 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 GALNT11Q8NCW6 608 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 BHLHE22Q8NFJ8 381 aaPredicted RBP9.71□□□□□ -0.86
NEDD8-205ENST00000527046 ST8SIA1Q92185 356 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 ABTB1Q969K4 478 aaPredicted RBP9.71□□□□□ -0.86
NEDD8-205ENST00000527046 ZBTB8AQ96BR9 441 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 C3orf49Q96BT1 292 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 MRGPRX4Q96LA9 322 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 RNF145Q96MT1 663 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 PRDM14Q9GZV8 571 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 HHATLQ9HCP6 504 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 CTPS2Q9NRF8 586 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 PNPLA3Q9NST1 481 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 DKKL1Q9UK85 242 aa9.71□□□□□ -0.86
NEDD8-205ENST00000527046 SMG1Q96Q15 3661 aaKnown RBP9.7□□□□□ -0.86
NEDD8-205ENST00000527046 NBASA2RRP1 2371 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 IGKV1D-42A0A075B6H8 117 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 A0A1B0GWA3 101 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 OR14I1A6ND48 311 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 GSTA4O15217 222 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 PRSS23O95084 383 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 ACTL6AO96019 429 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 STSP08842 583 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 ZNF17P17021 662 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 TACR3P29371 465 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 PTGS2P35354 604 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 SLC1A3P43003 542 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 SLC6A8P48029 635 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 RAC1P63000 192 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 GABPB1Q06547 395 aaPredicted RBP9.7□□□□□ -0.86
NEDD8-205ENST00000527046 BNIP2Q12982 314 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 OR1Q1Q15612 314 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 EIF2S3LQ2VIR3 472 aaKnown RBP9.7□□□□□ -0.86
NEDD8-205ENST00000527046 DNAL1Q4LDG9 190 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 ARHGAP11AQ6P4F7 1023 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 GFRALQ6UXV0 394 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 CYP2R1Q6VVX0 501 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 WDR88Q6ZMY6 472 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 ZNF550Q7Z398 422 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 GRINAQ7Z429 371 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 ATG4DQ86TL0 474 aaPredicted RBP9.7□□□□□ -0.86
NEDD8-205ENST00000527046 CARM1Q86X55 608 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 ULK2Q8IYT8 1036 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 MARVELD2Q8N4S9 558 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 FAM57AQ8TBR7 257 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 MCHR1Q99705 422 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 PRSS27Q9BQR3 290 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 PRDM4Q9UKN5 801 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 A4GNTQ9UNA3 340 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 POMPQ9Y244 141 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 SH3GLB1Q9Y371 365 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 FAM215AQ9Y5M1 114 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 AP4B1Q9Y6B7 739 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 ZNF462Q96JM2 2506 aa9.7□□□□□ -0.86
NEDD8-205ENST00000527046 A0A0B4J2E0 115 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 A0A1B0GX12 115 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 TMEM72A0PK05 275 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 ZC3H12DA2A288 527 aaKnown RBP9.69□□□□□ -0.86
NEDD8-205ENST00000527046 J3KTA2 159 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 ADAMDEC1O15204 470 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 FMO6PO60774 539 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 SLC19A2O60779 497 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 NPIPB7O75200 414 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 TOXO94900 526 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 NUDT14O95848 222 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 IFNA14P01570 189 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 PLA2G2AP14555 144 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 KLK2P20151 261 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms