RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 QPRTQ15274 297 aa14.21□□□□□ -0.13
PTPRU-210ENST00000527027 RAB35Q15286 201 aa14.21□□□□□ -0.13
PTPRU-210ENST00000527027 NDUFAF6Q330K2 333 aa14.21□□□□□ -0.13
PTPRU-210ENST00000527027 PIAS4Q8N2W9 510 aaPredicted RBP14.21□□□□□ -0.13
PTPRU-210ENST00000527027 TOR1AIP2Q8NFQ8 470 aa14.21□□□□□ -0.13
PTPRU-210ENST00000527027 RFWD2Q8NHY2 731 aa14.21□□□□□ -0.13
PTPRU-210ENST00000527027 ADAMTS15Q8TE58 950 aa14.21□□□□□ -0.13
PTPRU-210ENST00000527027 OR5B2Q96R09 309 aa14.21□□□□□ -0.13
PTPRU-210ENST00000527027 ZNF300Q96RE9 604 aaPredicted RBP14.21□□□□□ -0.13
PTPRU-210ENST00000527027 ACTRT3Q9BYD9 372 aa14.21□□□□□ -0.13
PTPRU-210ENST00000527027 TUBB1Q9H4B7 451 aa14.21□□□□□ -0.13
PTPRU-210ENST00000527027 ATP6V1HQ9UI12 483 aa14.21□□□□□ -0.13
PTPRU-210ENST00000527027 FAF1Q9UNN5 650 aaPredicted RBP14.21□□□□□ -0.13
PTPRU-210ENST00000527027 KCNE3Q9Y6H6 103 aa14.21□□□□□ -0.13
PTPRU-210ENST00000527027 LSM1O15116 133 aaKnown RBP14.2□□□□□ -0.14
PTPRU-210ENST00000527027 ZNF264O43296 627 aa14.2□□□□□ -0.14
PTPRU-210ENST00000527027 H6PDO95479 791 aa14.2□□□□□ -0.14
PTPRU-210ENST00000527027 CHEK2O96017 543 aa14.2□□□□□ -0.14
PTPRU-210ENST00000527027 KRT16P08779 473 aa14.2□□□□□ -0.14
PTPRU-210ENST00000527027 LINC00032P0C843 101 aa14.2□□□□□ -0.14
PTPRU-210ENST00000527027 BCKDHAP12694 445 aa14.2□□□□□ -0.14
PTPRU-210ENST00000527027 SLC25A16P16260 332 aa14.2□□□□□ -0.14
PTPRU-210ENST00000527027 CCT5P48643 541 aa14.2□□□□□ -0.14
PTPRU-210ENST00000527027 CBFBQ13951 182 aa14.2□□□□□ -0.14
PTPRU-210ENST00000527027 FBXW9Q5XUX1 488 aa14.2□□□□□ -0.14
PTPRU-210ENST00000527027 CYB5R2Q6BCY4 276 aa14.2□□□□□ -0.14
PTPRU-210ENST00000527027 FBXL14Q8N1E6 418 aa14.2□□□□□ -0.14
PTPRU-210ENST00000527027 ZNF614Q8N883 585 aa14.2□□□□□ -0.14
PTPRU-210ENST00000527027 PSMA8Q8TAA3 256 aa14.2□□□□□ -0.14
PTPRU-210ENST00000527027 SERINC1Q9NRX5 453 aa14.2□□□□□ -0.14
PTPRU-210ENST00000527027 LPAR3Q9UBY5 353 aa14.2□□□□□ -0.14
PTPRU-210ENST00000527027 POU2F3Q9UKI9 436 aa14.2□□□□□ -0.14
PTPRU-210ENST00000527027 FIS1Q9Y3D6 152 aa14.2□□□□□ -0.14
PTPRU-210ENST00000527027 PLCE1Q9P212 2302 aa14.2□□□□□ -0.14
PTPRU-210ENST00000527027 C8BP07358 591 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 DHRS4L1P0CG22 281 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 LAMP1P11279 417 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 UBL4AP11441 157 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 PTAFRP25105 342 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 FABP6P51161 128 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 CASP9P55211 416 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 TP53BP2Q13625 1128 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 GALNTL6Q49A17 601 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 TIGD2Q4W5G0 525 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 LIPMQ5VYY2 423 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 C3orf33Q6P1S2 294 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 SLC22A25Q6T423 547 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 KLHL17Q6TDP4 642 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 TMPPEQ6ZT21 453 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 DEPDC4Q8N2C3 294 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 MUC15Q8N387 334 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 TMCO5AQ8N6Q1 288 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 ZNF525Q8N782 197 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 CCDC63Q8NA47 563 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 OR7A2PQ8NGA2 310 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 OR56A1Q8NGH5 318 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 OR5P2Q8WZ92 322 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 FAM168AQ92567 244 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 HTRA1Q92743 480 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 QRSL1Q9H0R6 528 aaKnown RBP14.19□□□□□ -0.14
PTPRU-210ENST00000527027 GPATCH2Q9NW75 528 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 EMC3Q9P0I2 261 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 DNAJC15Q9Y5T4 150 aa14.19□□□□□ -0.14
PTPRU-210ENST00000527027 CIB4A0PJX0 185 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 TMEM114B3SHH9 223 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 SCAMP2O15127 329 aaKnown RBP14.18□□□□□ -0.14
PTPRU-210ENST00000527027 DNAJA2O60884 412 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 RAD51DO75771 328 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 CD40P25942 277 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 CRHR1P34998 444 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 THBS2P35442 1172 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 HPCAL1P37235 193 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 RPL3P39023 403 aaKnown RBP14.18□□□□□ -0.14
PTPRU-210ENST00000527027 DIO1P49895 249 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 ZNF83P51522 516 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 CCR4P51679 360 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 CSNK2A1P68400 391 aaPredicted RBP14.18□□□□□ -0.14
PTPRU-210ENST00000527027 CHRNEQ04844 493 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 PDK3Q15120 406 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 KRTAP24-1Q3LI83 254 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 SPDYE7PQ495Y7 208 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 KANK2Q63ZY3 851 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 MTDHQ86UE4 582 aaKnown RBP14.18□□□□□ -0.14
PTPRU-210ENST00000527027 HOMEZQ8IX15 550 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 IFT20Q8IY31 132 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 UBE2J2Q8N2K1 259 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 OR52N5Q8NH56 324 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 ST8SIA1Q92185 356 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 PROX1Q92786 737 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 TRMOQ9BU70 441 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 THUMPD3Q9BV44 507 aaKnown RBP14.18□□□□□ -0.14
PTPRU-210ENST00000527027 AMBRA1Q9C0C7 1298 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 LAT2Q9GZY6 243 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 SHARPINQ9H0F6 387 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 C12orf65Q9H3J6 166 aaKnown RBP14.18□□□□□ -0.14
PTPRU-210ENST00000527027 SLC25A15Q9Y619 301 aa14.18□□□□□ -0.14
PTPRU-210ENST00000527027 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.18□□□□□ -0.142e-8■■■□□ 17.7
PTPRU-210ENST00000527027 IGKV3D-15A0A087WSY6 115 aa14.17□□□□□ -0.14
PTPRU-210ENST00000527027 SERINC4A6NH21 518 aa14.17□□□□□ -0.14
PTPRU-210ENST00000527027 CCT8L1PA6NM43 557 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms